RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 NOX1Q9Y5S8 564 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 TSPAN11A1L157 253 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 THBS1P07996 1170 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 CRABP1P29762 137 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 DLX5P56178 289 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 IL13RA1P78552 427 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 CBFBQ13951 182 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 UBE2NLQ5JXB2 153 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 LCORQ96JN0 433 aaPredicted RBP12.55□□□□□ -0.4
GSE1-203ENST00000405402 HIST1H2AAQ96QV6 131 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 CDCA3Q99618 268 aaPredicted RBP12.55□□□□□ -0.4
GSE1-203ENST00000405402 ZNF700Q9H0M5 742 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 C20orf85Q9H1P6 137 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 CAMK2AQ9UQM7 478 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 C14orf166Q9Y224 244 aaKnown RBP12.55□□□□□ -0.4
GSE1-203ENST00000405402 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 ZNF217O75362 1048 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 HLA-AP01891 365 aaKnown RBP12.55□□□□□ -0.4
GSE1-203ENST00000405402 COL9A1P20849 921 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 FXYD4P59646 89 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 GPR155Q7Z3F1 870 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 ZAR1Q86SH2 424 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 FAM109AQ8N4B1 249 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 SELENOIQ9C0D9 397 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 FAM60AQ9NP50 221 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
GSE1-203ENST00000405402 NPFFR2Q9Y5X5 522 aa12.55□□□□□ -0.4
GSE1-203ENST00000405402 TRBV11-1A0A0K0K1C0 115 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 ZNF850A8MQ14 1090 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 ZNF35P13682 527 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 OPCMLQ14982 345 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 FAM69AQ5T7M9 428 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 OR51S1Q8NGJ8 323 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 CCDC86Q9H6F5 360 aaKnown RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 COA3Q9Y2R0 106 aaPredicted RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 MYO16Q9Y6X6 1858 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 RBBP6Q7Z6E9 1792 aaKnown RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 PLRG1O43660 514 aaKnown RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 CDK2P24941 298 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 DCTDP32321 178 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 GZMKP49863 264 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 TMEM176BQ3YBM2 270 aaPredicted RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 LYRM4Q9HD34 91 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 A0A1W2PPV9 198 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 M0R036 132 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 SULT2B1O00204 365 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 GLCEO94923 617 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 FARS2O95363 451 aaKnown RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 ATF1P18846 271 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 OTX2P32243 289 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 CSNK2A1P68400 391 aaPredicted RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 SPAG16Q8N0X2 631 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 LRRC18Q8N456 261 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 CSNK2A3Q8NEV1 391 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 COX14Q96I36 57 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 STACQ99469 402 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 URM1Q9BTM9 101 aaKnown RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 ANKRD10Q9NXR5 420 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 C19orf25Q9UFG5 118 aaPredicted RBP12.54□□□□□ -0.4
GSE1-203ENST00000405402 SIGLEC7Q9Y286 467 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 RLFQ13129 1914 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 GREB1Q4ZG55 1949 aa12.54□□□□□ -0.4
GSE1-203ENST00000405402 CCSO14618 274 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 TP53I11O14683 189 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 ZNF16P17020 682 aaPredicted RBP12.53□□□□□ -0.4
GSE1-203ENST00000405402 GABRB1P18505 474 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 SLC6A8P48029 635 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 TSSK4Q6SA08 328 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
GSE1-203ENST00000405402 TEX19Q8NA77 164 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 ELP5Q8TE02 316 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 THRSPQ92748 146 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 OR2A5Q96R48 311 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 ENKD1Q9H0I2 346 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 NPAP1Q9NZP6 1156 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 KCNN3Q9UGI6 736 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 GPLD1P80108 840 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 RPL18Q07020 188 aaKnown RBP12.53□□□□□ -0.4
GSE1-203ENST00000405402 SLC9A3R2Q15599 337 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 ZNF704Q6ZNC4 412 aaPredicted RBP12.53□□□□□ -0.4
GSE1-203ENST00000405402 ADAMTS18Q8TE60 1221 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 KIAA1143Q96AT1 154 aaPredicted RBP12.53□□□□□ -0.4
GSE1-203ENST00000405402 WDR76Q9H967 626 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 HRKO00198 91 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 RAD52P43351 418 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 EEF1A2Q05639 463 aaKnown RBP12.53□□□□□ -0.4
GSE1-203ENST00000405402 CDK5R1Q15078 307 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 C9orf135Q5VTT2 229 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 GPR139Q6DWJ6 353 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
GSE1-203ENST00000405402 OR7G1Q8NGA0 311 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 OR51T1Q8NGJ9 327 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 FGGYQ96C11 551 aa12.53□□□□□ -0.4
GSE1-203ENST00000405402 SHDQ96IW2 340 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms