RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 K7EM74 188 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 DCTN6O00399 190 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CEACAM4O75871 244 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 RENP00797 406 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PTHP01270 115 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 HLA-DQA2P01906 255 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 HPNP05981 417 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TSPAN19P0C672 248 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SPI1P17947 270 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PCMT1P22061 227 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 GSTT1P30711 240 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 NAA10P41227 235 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 SLC15A1P46059 708 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 GTF2A1P52655 376 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 BIDP55957 195 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 GFRA1P56159 465 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CLDN15P56746 228 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 LGALS3BPQ08380 585 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 RAB40BQ12829 278 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 C3AR1Q16581 482 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 GPR139Q6DWJ6 353 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 BORAQ6PGQ7 559 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PXKQ7Z7A4 578 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 FAM109AQ8N4B1 249 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 OR10H4Q8NGA5 316 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 OR6S1Q8NH40 331 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZNRF4Q8WWF5 429 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ROBO4Q8WZ75 1007 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZHX1-C8orf76Q96EF9 292 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZNF845Q96IR2 970 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 SMAD5Q99717 465 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 SRXN1Q9BYN0 137 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TTTY10Q9BZA0 68 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ACOT13Q9NPJ3 140 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 FKBP14Q9NWM8 211 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TRAPPC4Q9Y296 219 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 LIPGQ9Y5X9 500 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 TNRC6AQ8NDV7 1962 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 PKD1L2Q7Z442 2459 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SMG1Q96Q15 3661 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 PRSS37A4D1T9 235 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 A6NHS1 94 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 AQP7P3A6NL99 342 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 NPIPA2E9PIF3 369 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 MKRN2OSH3BPM6 223 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 H3BSA7 217 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 M0R3G1 203 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 MYL12BO14950 172 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZNHIT1O43257 154 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 SLC16A7O60669 478 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 EIF1BO60739 113 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 GLSO94925 669 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 PMS2P2O95744 297 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 RAB36O95755 333 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 GPANK1O95872 356 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PDGFAP04085 211 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ADRB1P08588 477 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 APEHP13798 732 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 DCKP27707 260 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ETV1P50549 477 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 DAP3P51398 398 aaKnown RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 HCCSP53701 268 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CXADRP78310 365 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CAMK2DQ13557 499 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 EMC4Q5J8M3 183 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 GPR107Q5VW38 600 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 IGFL2Q6UWQ7 119 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ESPNLQ6ZVH7 1005 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 GGNQ86UU5 652 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 CLVS1Q8IUQ0 354 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 OR6V1Q8N148 313 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZNF511Q8NB15 262 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 OR2V1Q8NHB1 315 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 FAR1Q8WVX9 515 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ABTB1Q969K4 478 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 ABHD17AQ96GS6 310 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 NUAK2Q9H093 628 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 ZNF71Q9NQZ8 489 aaPredicted RBP3.32□□□□□ -1.88
RTN4-208ENST00000404909 B3GAT1Q9P2W7 334 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 RTTNQ86VV8 2226 aa3.32□□□□□ -1.88
RTN4-208ENST00000404909 PNMA8CA0A1B0GUJ8 204 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SLC35F4A4IF30 521 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TVP23AA6NH52 213 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TRIM64CA6NLI5 447 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ZNF726A6NNF4 738 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 C12orf71A8MTZ7 269 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ZNF99A8MXY4 864 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 C1QTNF9BB2RNN3 333 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 K7ENP7 123 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SELENOFO60613 162 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TXNDC12O95881 172 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 C1QTNF9P0C862 333 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 PIPP12273 146 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 NR4A1P22736 598 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ALDH3B2P48448 385 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 P2RY4P51582 365 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CLDN17P56750 224 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 RAC3P60763 192 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 FMODQ06828 376 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms