RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 COMTD1Q86VU5 262 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SKA3Q8IX90 412 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CCDC36Q8IYA8 594 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TEX29Q8N6K0 151 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 OR52P1PQ8NH57 321 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CCDC115Q96NT0 180 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PKP2Q99959 881 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 OR51B6Q9H340 312 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MED29Q9NX70 200 aa10.08□□□□□ -0.8
SPTLC1P3-201ENST00000403408 IGHV1-69-2A0A0G2JMI3 117 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 LOC102725191A0A1B0GVB3 256 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ITM2AO43736 263 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 AHSA1O95433 338 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF250P15622 560 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GRPRP30550 384 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CHI3L1P36222 383 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SEC61A1P61619 476 aaKnown RBP10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 IL13RA1P78552 427 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 BAMBIQ13145 260 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NKPD1Q17RQ9 610 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 WHAMMP3Q1A5X7 153 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF440Q8IYI8 595 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PIK3C3Q8NEB9 887 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TESCQ96BS2 214 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RAB39BQ96DA2 213 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NKIRAS2Q9NYR9 191 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MID2Q9UJV3 735 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF443Q9Y2A4 671 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 DNAH9Q9NYC9 4486 aa10.07□□□□□ -0.8
SPTLC1P3-201ENST00000403408 DOCK11Q5JSL3 2073 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MDFIC2A0A1B0GVS7 189 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CCDC154A6NI56 674 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SERPINA5P05154 406 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NR2F1P10589 423 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 HTR2AP28223 471 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GCH1P30793 250 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GLO1Q04760 184 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CAMK2DQ13557 499 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 C1DQ13901 141 aaKnown RBP10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TSTQ16762 297 aaKnown RBP10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ANXA8L1Q5VT79 327 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RGS7BPQ6MZT1 257 aaPredicted RBP10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 C1QL4Q86Z23 238 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SYT14Q8NB59 555 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 DPY30Q9C005 99 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 C20orf27Q9GZN8 174 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NPHS2Q9NP85 383 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PLEK2Q9NYT0 353 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 KLHL14Q9P2G3 628 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SLC7A8Q9UHI5 535 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 BTNL2Q9UIR0 455 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NUP50Q9UKX7 468 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF346Q9UL40 294 aaKnown RBP10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NOX1Q9Y5S8 564 aa10.06□□□□□ -0.8
SPTLC1P3-201ENST00000403408 IGHV3OR16-10A0A075B7F0 116 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CLDN25C9JDP6 229 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 LRRN3E7EW58 273 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CLDN34H7C241 214 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 AIM2O14862 343 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 UBOX5O94941 541 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 IGHV4-38-2P0DP08 117 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ETFAP13804 333 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 UQCRBP14927 111 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GATA3P23771 443 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RAD52P43351 418 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NME5P56597 212 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 UFM1P61960 85 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RPS23P62266 143 aaKnown RBP10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RELBQ01201 579 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 LIN52Q52LA3 116 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RNF220Q5VTB9 566 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 C6orf89Q6UWU4 347 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 H1FNTQ75WM6 255 aaPredicted RBP10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PEX5LQ8IYB4 626 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TMIGD2Q96BF3 282 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SLC41A3Q96GZ6 507 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 LRR1Q96L50 414 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 FOXB1Q99853 325 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MKS1Q9NXB0 559 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PURGQ9UJV8 347 aaKnown RBP10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 POFUT2Q9Y2G5 429 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MMP24Q9Y5R2 645 aa10.05□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PPIAL4EA0A075B759 164 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 A0A096LPI6 279 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PPIAL4DF5H284 164 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SPAG7O75391 227 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RAB36O95755 333 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 IGHV1-46P01743 117 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ALDOCP09972 364 aaKnown RBP10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 OR8G3PP0DMU2 310 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PPIAL4FP0DN26 164 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF12P17014 697 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 NCF2P19878 526 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 KLF3P57682 345 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 COPZ1P61923 177 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GALK2Q01415 458 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF154Q13106 437 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms