RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TFAP2EQ6VUC0 442 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 LUZP2Q86TE4 346 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 Q96M85 177 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 TSPAN32Q96QS1 320 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 OR2M2Q96R28 347 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 GPX7Q96SL4 187 aaPredicted RBP14.1□□□□□ -0.15
HMGA1-204ENST00000401473 RNPEPL1Q9HAU8 725 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 JKAMPQ9P055 326 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 PRSS50Q9UI38 385 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 IER3IP1Q9Y5U9 82 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 CDH10Q9Y6N8 788 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 RTTNQ86VV8 2226 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 CENPEQ02224 2701 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 HECTD1Q9ULT8 2610 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 A0A1W2PRG6 482 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 A8MXE2 369 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 DVL2O14641 736 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 CD8BP10966 210 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 POLR2IP36954 125 aaKnown RBP14.1□□□□□ -0.15
HMGA1-204ENST00000401473 OR3A2P47893 321 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 SMSP52788 366 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 CAMK2DQ13557 499 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 TSPO2Q5TGU0 170 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 CASP12Q6UXS9 341 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 DPY19L2P2Q6ZN68 376 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 ZBTB49Q6ZSB9 765 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 TMEM123Q8N131 208 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 OR6X1Q8NH79 312 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 MAGEE2Q8TD90 523 aaPredicted RBP14.1□□□□□ -0.15
HMGA1-204ENST00000401473 EME1Q96AY2 570 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 TACO1Q9BSH4 297 aaKnown RBP14.1□□□□□ -0.15
HMGA1-204ENST00000401473 PAPOLBQ9NRJ5 636 aaKnown RBP14.1□□□□□ -0.15
HMGA1-204ENST00000401473 SLC7A10Q9NS82 523 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 PARPBPQ9NWS1 579 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 KIF17Q9P2E2 1029 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 HCFC1P51610 2035 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 NPIPB13A6NJU9 1138 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 NPIPB4C9JG80 1138 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 BHLHE40O14503 412 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 PPP1R3DO95685 299 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 OSMP13725 252 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 RPL27P61353 136 aaKnown RBP14.09□□□□□ -0.15
HMGA1-204ENST00000401473 TOP3AQ13472 1001 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-204ENST00000401473 TRIP10Q15642 601 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 PHYHD1Q5SRE7 291 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 XKRXQ6PP77 449 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 CLDN22Q8N7P3 220 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 ZNF519Q8TB69 540 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 SSC4DQ8WTU2 575 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 CA5BP1Q8WTZ4 195 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 ASB10Q8WXI3 467 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 RBM4BQ9BQ04 359 aaKnown RBP14.09□□□□□ -0.15
HMGA1-204ENST00000401473 RBM4Q9BWF3 364 aaKnown RBP14.09□□□□□ -0.15
HMGA1-204ENST00000401473 TSSK6Q9BXA6 273 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 MRPL13Q9BYD1 178 aaKnown RBP14.09□□□□□ -0.15
HMGA1-204ENST00000401473 KRT84Q9NSB2 600 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 PROCRQ9UNN8 238 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 RCE1Q9Y256 329 aa14.09□□□□□ -0.15
HMGA1-204ENST00000401473 NKX2-6A6NCS4 301 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 EEF1E1-BLOC1S5C9J1V9 151 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 H3BN98 237 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 IMPA2O14732 288 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 EEF1E1O43324 174 aaKnown RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 UPK3AO75631 287 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 IGHMP01871 453 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 POU1F1P28069 291 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 PEX2P28328 305 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 FOXG1P55316 489 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 SLC34A1Q06495 639 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 RIPK1Q13546 671 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 DAG1Q14118 895 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ZNF362Q5T0B9 420 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 TMEM236Q5W0B7 351 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 CARD17Q5XLA6 110 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 LINGO2Q7L985 606 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ZNF100Q8IYN0 542 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 PARP8Q8N3A8 854 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ARIH2OSQ8N7S6 290 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 OR4Q3Q8NH05 313 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ASB5Q8WWX0 329 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 APH1AQ96BI3 265 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 RASD2Q96D21 266 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 SLC25A44Q96H78 314 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ERMAPQ96PL5 475 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 C9orf16Q9BUW7 83 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 IFT27Q9BW83 186 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 POLDIP3Q9BY77 421 aaKnown RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 FOXD3Q9UJU5 478 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 POFUT2Q9Y2G5 429 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ZNF726A6NNF4 738 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 MSTNO14793 375 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 CASQ2O14958 399 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 AGAP20933 346 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 IGFBP5P24593 272 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 SLC6A6P31641 620 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 GIPRP48546 466 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ALDH3A2P51648 485 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 DBPQ10586 325 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ACSM5Q6NUN0 579 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 RPL13AP3Q6NVV1 102 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms