RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SPATA46Q5T0L3 261 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ST8SIA4Q92187 359 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 TFAP2CQ92754 450 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 PIGTQ969N2 578 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 FCRL1Q96LA6 429 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 MTCH1Q9NZJ7 389 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 LIPT1Q9Y234 373 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 V9GY05 133 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 C4orf47A7E2U8 309 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 SEMG1P04279 462 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 SPATS1Q496A3 300 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 FAM219BQ5XKK7 198 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 MED25Q71SY5 747 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 PGAP1Q75T13 922 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 GGHQ92820 318 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 POFUT1Q9H488 388 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ZNF286AQ9HBT8 521 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 SCML1Q9UN30 329 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 TCAPO15273 167 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 HOXD11P31277 338 aaPredicted RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 SLC1A3P43003 542 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 TGFBR3Q03167 851 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 RAB31Q13636 194 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ACKR1Q16570 336 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 PHYHD1Q5SRE7 291 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 OR4C5Q8NGB2 326 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 PSMF1Q92530 271 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 BPIFA2Q96DR5 249 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 TRMT2BQ96GJ1 504 aaKnown RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 C3orf30Q96M34 536 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 C11orf54Q9H0W9 315 aaPredicted RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 TNFSF11O14788 317 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ATXN7O15265 892 aaPredicted RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 TACR3P29371 465 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 TSFMP43897 325 aaKnown RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 HOXA1P49639 335 aaPredicted RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 IGSF11Q5DX21 431 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 MANEALQ5VSG8 457 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 DBX2Q6ZNG2 339 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 CXorf67Q86X51 503 aaPredicted RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 ADAMTS18Q8TE60 1221 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ESRP2Q9H6T0 727 aaKnown RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 NPFFR2Q9Y5X5 522 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 RP1L1Q8IWN7 2480 aaPredicted RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 A0A087WV62 115 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 A0A1W2PRD5 423 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 A0A1W2PRF3 423 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 A0A1W2PRM7 423 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 C7orf72A4D263 438 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 SHISA8B8ZZ34 492 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ADAM10O14672 748 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 POLR2IP36954 125 aaKnown RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 SKA3Q8IX90 412 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 CPXM2Q8N436 756 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 A0A1W2PNR3 127 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ZNF891A8MT65 544 aaPredicted RBP8.64□□□□□ -1.03
ATL3-201ENST00000398868 MSTNO14793 375 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 SOX15O60248 233 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 DPM1O60762 260 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 HAGHQ16775 308 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 H3F3CQ6NXT2 135 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 SIMC1Q8NDZ2 872 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 SFXN5Q8TD22 340 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 ELOVL3Q9HB03 270 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 TRIM23P36406 574 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 ZNF74Q16587 644 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 CGB2Q6NT52 195 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 CORO6Q6QEF8 472 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 IL34Q6ZMJ4 242 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 TPRA1Q86W33 373 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 SLC43A2Q8N370 569 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 ABHD4Q8TB40 342 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 SLC37A2Q8TED4 501 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 SMAP2Q8WU79 429 aaPredicted RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 SECTM1Q8WVN6 248 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 NAT6Q93015 286 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 ZBED3Q96IU2 234 aaPredicted RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 PLSCR3Q9NRY6 295 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 GNG12Q9UBI6 72 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 ZNF638Q14966 1978 aaKnown RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 A0A1B0GTW7 788 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 AGAP14A8MT82 685 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 P2RY10O00398 339 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 ZNF593O00488 134 aaPredicted RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 C7P10643 843 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 NUDT1P36639 197 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 ELLP55199 621 aaPredicted RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 RSPO2Q6UXX9 243 aaPredicted RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 RTN4RL1Q86UN2 441 aaPredicted RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 PRO1933Q9H354 126 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 KCND3Q9UK17 655 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 EMC9Q9Y3B6 208 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 KIR2DS5A0A0G2JLQ3 304 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 A0A0G2JNG1 304 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 TMEM269A0A1B0GVZ9 245 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 ZC3H12DA2A288 527 aaKnown RBP8.63□□□□□ -1.03
ATL3-201ENST00000398868 PRRT4C9JH25 899 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 KIR2DS3K7RE56 304 aa8.63□□□□□ -1.03
ATL3-201ENST00000398868 APEX1P27695 318 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms