RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 BCL10O95999 233 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 HRGP04196 525 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 LIMS1P48059 325 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 GABRA6Q16445 453 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 TIMM23BQ5SRD1 257 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 PHYHD1Q5SRE7 291 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 OR7E24Q6IFN5 339 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 C20orf196Q8IYI0 205 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 OR6N1Q8NGY5 312 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 CANT1Q8WVQ1 401 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 POLDIP3Q9BY77 421 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 GPR35Q9HC97 309 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 TMCC3Q9ULS5 477 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 TACC2O95359 2948 aa18.62■□□□□ 0.57
TSPAN4-206ENST00000397408 KRT36O76013 467 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 CSNK1A1P48729 337 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 ERFP50548 548 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 DAP3P51398 398 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 FHL1Q13642 323 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 PPA1Q15181 289 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 ACKR1Q16570 336 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 ANKDD1AQ495B1 522 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 IGFN1Q86VF2 1251 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 P2RY8Q86VZ1 359 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 MUCL1Q96DR8 90 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 PIK3IP1Q96FE7 263 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 LRR1Q96L50 414 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 MUS81Q96NY9 551 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 TNFRSF13CQ96RJ3 184 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 MMADHCQ9H3L0 296 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 CRLF2Q9HC73 371 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 LYVE1Q9Y5Y7 322 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 POLQO75417 2590 aa18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 HRNRQ86YZ3 2850 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-206ENST00000397408 NAV2Q8IVL1 2488 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 RPL36A-HNRNPH2H7BZ11 118 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 TNFRSF11BO00300 401 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 EBAG9O00559 213 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 OR10H3O60404 316 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 TOP3AQ13472 1001 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 CEACAM16Q2WEN9 425 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 BEX5Q5H9J7 111 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 C17orf78Q8N4C9 275 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 OR1K1Q8NGR3 316 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 OR52N5Q8NH56 324 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 ASB10Q8WXI3 467 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 ZNF566Q969W8 418 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 SLC25A44Q96H78 314 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 RSRC1Q96IZ7 334 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 CHID1Q9BWS9 393 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 ULBP2Q9BZM5 246 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 B3GAT2Q9NPZ5 323 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 SPG11Q96JI7 2443 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 AKAP6Q13023 2319 aa18.6■□□□□ 0.57
TSPAN4-206ENST00000397408 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 A0A1W2PR80 420 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 TCRBV3S1A0A5B6 114 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 KLF4O43474 513 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 HOXC12P31275 282 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 SH3BGRP55822 239 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 CTXN1P60606 82 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 ZBED5Q49AG3 693 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 OR2T5Q6IEZ7 315 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 SEZ6L2Q6UXD5 910 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 HDDC2Q7Z4H3 204 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 ZER1Q7Z7L7 766 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 LRRC75AQ8NAA5 344 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 OR2T29Q8NH02 315 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 ZNF837Q96EG3 531 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 LURAP1Q96LR2 239 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 GPA33Q99795 319 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 TXNIPQ9H3M7 391 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 REEP1Q9H902 201 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 SLC17A5Q9NRA2 495 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 VNN3Q9NY84 501 aa18.59■□□□□ 0.57
TSPAN4-206ENST00000397408 NPIPB13A6NJU9 1138 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 NPIPB4C9JG80 1138 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 IGHG1P01857 330 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 PGA4P0DJD7 388 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 PGA3P0DJD8 388 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 IFNGR2P38484 337 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 HMGA2P52926 109 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 PRPS1P60891 318 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 RUNX1T1Q06455 604 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 PPP1R8Q12972 351 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 HIKESHIQ53FT3 197 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 ARMC4Q5T2S8 1044 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 KLHL24Q6TFL4 600 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 ASRGL1Q7L266 308 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 CDC20BQ86Y33 519 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 NOXO1Q8NFA2 376 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 OR4C15Q8NGM1 316 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 TMEM54Q969K7 222 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 NDEL1Q9GZM8 345 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 NGBQ9NPG2 151 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 GLTPQ9NZD2 209 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 SIGLEC7Q9Y286 467 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 SAMHD1Q9Y3Z3 626 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 SLC25A15Q9Y619 301 aa18.58■□□□□ 0.57
TSPAN4-206ENST00000397408 UNC119BA6NIH7 251 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms