RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GCDHQ92947 438 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TAAR8Q969N4 342 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 MRPL24Q96A35 216 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TMEM186Q96B77 213 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 KTI12Q96EK9 354 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 OR2M2Q96R28 347 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 SORT1Q99523 831 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 PTDSS2Q9BVG9 487 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 METTL17Q9H7H0 456 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 NOX3Q9HBY0 568 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 SSU72Q9NP77 194 aaKnown RBP7.53□□□□□ -1.2
CAPN3-208ENST00000397204 B3GAT1Q9P2W7 334 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 GRIP1Q9Y3R0 1128 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 CHST2Q9Y4C5 530 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 NOX1Q9Y5S8 564 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 GPR45Q9Y5Y3 372 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TGP01266 2768 aa7.53□□□□□ -1.2
CAPN3-208ENST00000397204 TRAV20A0A0B4J274 112 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF503-AS2A6NEH8 195 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 MS4A18H0YCH9 400 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 TM9SF1O15321 606 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ANP32DO95626 131 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 MSMBP08118 114 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ALDOCP09972 364 aaKnown RBP7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ETFAP13804 333 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 EGR1P18146 543 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 COL8A2P25067 703 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 NME5P56597 212 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 LMO4P61968 165 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 RPS23P62266 143 aaKnown RBP7.52□□□□□ -1.21
CAPN3-208ENST00000397204 STX3Q13277 289 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 CCNIQ14094 377 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 MFSD13AQ14CX5 517 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 GSG1Q2KHT4 349 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 MS4A18Q3C1V0 323 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF311Q5JNZ3 666 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 KRT80Q6KB66 452 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 C6orf89Q6UWU4 347 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 SERPINA11Q86U17 422 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 LSRQ86X29 649 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-208ENST00000397204 TMEM123Q8N131 208 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 LSMEM1Q8N8F7 131 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ADPRHL1Q8NDY3 354 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 SEMA6DQ8NFY4 1073 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 OR6S1Q8NH40 331 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 CLDND2Q8NHS1 167 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 DNAJA4Q8WW22 397 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-208ENST00000397204 SLC38A4Q969I6 547 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF75AQ96N20 296 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 JMJD8Q96S16 334 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 MRPL37Q9BZE1 423 aaKnown RBP7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF385DQ9H6B1 395 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 TPT1P8Q9HAU6 139 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 BCL2L10Q9HD36 194 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 B3GAT2Q9NPZ5 323 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 PNPOQ9NVS9 261 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 RPS6KB2Q9UBS0 482 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 FBXL3Q9UKT7 428 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF346Q9UL40 294 aaKnown RBP7.52□□□□□ -1.21
CAPN3-208ENST00000397204 PCDHB10Q9UN67 800 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 POFUT2Q9Y2G5 429 aa7.52□□□□□ -1.21
CAPN3-208ENST00000397204 TRAV36DV7A0A075B6V5 113 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 TRPC5OSA6NMA1 111 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF726A6NNF4 738 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 FAM157AC9JC47 383 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 TRIM77I1YAP6 450 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 M0R3G1 203 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 SDHDO14521 159 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 GSC2O15499 205 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 SLC22A3O75751 556 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 HLA-HP01893 362 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 HPXP02790 462 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 BCHEP06276 602 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 GAAP10253 952 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 SAGP10523 405 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 CD79AP11912 226 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF14P17017 642 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 TCN1P20061 433 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 GRPRP30550 384 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 RAB1AP62820 205 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ACTG1P63261 375 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 MYBPC1Q00872 1141 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 GALK2Q01415 458 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 MSMPQ1L6U9 139 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 MMEL1Q495T6 779 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 GKAP1Q5VSY0 366 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ACSM5Q6NUN0 579 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 FAHD2BQ6P2I3 314 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ULK3Q6PHR2 472 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 SHQ1Q6PI26 577 aaKnown RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 NHLRC1Q6VVB1 395 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF813Q6ZN06 617 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 MSANTD1Q6ZTZ1 278 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 PEG10Q86TG7 708 aaKnown RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 CARM1Q86X55 608 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 UEVLDQ8IX04 471 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 C20orf196Q8IYI0 205 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 OR51F2Q8NH61 342 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 MGARPQ8TDB4 240 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms