RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TEP1Q99973 2627 aaKnown RBP12.83□□□□□ -0.36
SEC13-208ENST00000397109 IGKV1D-42A0A075B6H8 117 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 M0R3H8 397 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 TPST2O60704 377 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 E2F6O75461 281 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 CD3EP07766 207 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 ZNF43P17038 809 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 CDH12P55289 794 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 ADARB1P78563 741 aaKnown RBP12.82□□□□□ -0.36
SEC13-208ENST00000397109 TSPO2Q5TGU0 170 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 USP51Q70EK9 711 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 H1FNTQ75WM6 255 aaPredicted RBP12.82□□□□□ -0.36
SEC13-208ENST00000397109 VTCN1Q7Z7D3 282 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 C1orf162Q8NEQ5 155 aaPredicted RBP12.82□□□□□ -0.36
SEC13-208ENST00000397109 OR4D11Q8NGI4 311 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 OR6T1Q8NGN1 323 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 TPD52L3Q96J77 140 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 MUS81Q96NY9 551 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 OXGR1Q96P68 337 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 ZNF385AQ96PM9 386 aaKnown RBP12.82□□□□□ -0.36
SEC13-208ENST00000397109 TMEM43Q9BTV4 400 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 FAM192AQ9GZU8 254 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 SLCO5A1Q9H2Y9 848 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 SH3GLB1Q9Y371 365 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 RNF115Q9Y4L5 304 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 ORC6Q9Y5N6 252 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 CORINQ9Y5Q5 1042 aa12.82□□□□□ -0.36
SEC13-208ENST00000397109 LOC102725191A0A1B0GVB3 256 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 CHP2O43745 196 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 RAD51DO75771 328 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 ITGA5P08648 1049 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 THRBP10828 461 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 CDH2P19022 906 aaPredicted RBP12.81□□□□□ -0.36
SEC13-208ENST00000397109 MPGP29372 298 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 IL18R1Q13478 541 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 NPTX1Q15818 432 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 GABRA6Q16445 453 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 IQCCQ4KMZ1 466 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 ENTPD8Q5MY95 495 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 ADAM5Q6NVV9 412 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 LSRQ86X29 649 aaPredicted RBP12.81□□□□□ -0.36
SEC13-208ENST00000397109 C17orf78Q8N4C9 275 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 ADPRHL1Q8NDY3 354 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 CCL19Q99731 98 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 POLR2J2Q9GZM3 115 aaKnown RBP12.81□□□□□ -0.36
SEC13-208ENST00000397109 POLR2J3Q9H1A7 115 aaKnown RBP12.81□□□□□ -0.36
SEC13-208ENST00000397109 REEP1Q9H902 201 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 MYRFQ9Y2G1 1151 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 CELSR1Q9NYQ6 3014 aa12.81□□□□□ -0.36
SEC13-208ENST00000397109 MAP1AP78559 2803 aaPredicted RBP12.81□□□□□ -0.36
SEC13-208ENST00000397109 TRAPPC13A5PLN9 417 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 M0R082 166 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 HS3ST1O14792 307 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 TMCC2O75069 709 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 KRT33AO76009 404 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 PLAUP00749 431 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 MT-ND1P03886 318 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 IFNW1P05000 195 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 GRPRP30550 384 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 TUBA4AP68366 448 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 VLDLRP98155 873 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 C1DQ13901 141 aaKnown RBP12.8□□□□□ -0.36
SEC13-208ENST00000397109 TBPL2Q6SJ96 375 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 ZNF611Q8N823 705 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 SCAIQ8N9R8 606 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 ZNF555Q8NEP9 628 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 VANGL1Q8TAA9 524 aaPredicted RBP12.8□□□□□ -0.36
SEC13-208ENST00000397109 ZNF417Q8TAU3 575 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 MPP4Q96JB8 637 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 ZNF587Q96SQ5 575 aaPredicted RBP12.8□□□□□ -0.36
SEC13-208ENST00000397109 ASPNQ9BXN1 380 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 MRPS26Q9BYN8 205 aaKnown RBP12.8□□□□□ -0.36
SEC13-208ENST00000397109 AMBRA1Q9C0C7 1298 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 RCE1Q9Y256 329 aa12.8□□□□□ -0.36
SEC13-208ENST00000397109 RAI1Q7Z5J4 1906 aaPredicted RBP12.8□□□□□ -0.36
SEC13-208ENST00000397109 ALPK2Q86TB3 2170 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 DPRXA6NFQ7 191 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 CPSF4LA6NMK7 179 aaKnown RBP12.79□□□□□ -0.36
SEC13-208ENST00000397109 SLC16A6O15403 523 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 AKAP8O43823 692 aaKnown RBP12.79□□□□□ -0.36
SEC13-208ENST00000397109 SMPD2O60906 423 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 TNFRSF1BP20333 461 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 HOXC12P31275 282 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 OR1E2P47887 323 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 HMGA2P52926 109 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 KCTD21Q4G0X4 260 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 NIPAL3Q6P499 406 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 KLHL17Q6TDP4 642 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 SEZ6L2Q6UXD5 910 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 LINC00114Q6XXX2 140 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 TSEN54Q7Z6J9 526 aaKnown RBP12.79□□□□□ -0.36
SEC13-208ENST00000397109 RBM45Q8IUH3 476 aaKnown RBP12.79□□□□□ -0.36
SEC13-208ENST00000397109 P3H2Q8IVL5 708 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 LRRC75A-AS1Q8N1F1 130 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 KDM8Q8N371 416 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 ADAMTS16Q8TE57 1224 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 AKAP1Q92667 903 aaKnown RBP eCLIP12.79□□□□□ -0.36
SEC13-208ENST00000397109 SLC41A3Q96GZ6 507 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms