RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 SLC24A3Q9HC58 644 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 PMF1-BGLAPU3KQ54 211 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 ZFHX4Q86UP3 3567 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 CHD8Q9HCK8 2581 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 DCTN6O00399 190 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 KLK10O43240 276 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 SELENOFO60613 162 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 CYB561P49447 251 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 ENTPD1P49961 510 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 OR12D2P58182 307 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 RPS25P62851 125 aaKnown RBP11.31□□□□□ -0.6
SSH2-203ENST00000394848 TLE3Q04726 772 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 SRSF6Q13247 344 aaKnown RBP11.31□□□□□ -0.6
SSH2-203ENST00000394848 GPR50Q13585 617 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 DCAF10Q5QP82 559 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 GPALPP1Q8IXQ4 340 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 PM20D2Q8IYS1 436 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 BEST3Q8N1M1 668 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 GTPBP8Q8N3Z3 284 aaPredicted RBP11.31□□□□□ -0.6
SSH2-203ENST00000394848 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 ZNF519Q8TB69 540 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 SLC25A43Q8WUT9 341 aaPredicted RBP11.31□□□□□ -0.6
SSH2-203ENST00000394848 TRMT61AQ96FX7 289 aaKnown RBP11.31□□□□□ -0.6
SSH2-203ENST00000394848 TMEM41AQ96HV5 264 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 C4orf36Q96KX1 117 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 TM9SF2Q99805 663 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 SYT4Q9H2B2 425 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 RERGLQ9H628 205 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 TMEM185BQ9H7F4 350 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 SACM1LQ9NTJ5 587 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 ALKBH4Q9NXW9 302 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 TEKT2Q9UIF3 430 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 B3GALT5Q9Y2C3 310 aa11.31□□□□□ -0.6
SSH2-203ENST00000394848 RPH3AQ9Y2J0 694 aaPredicted RBP11.31□□□□□ -0.6
SSH2-203ENST00000394848 IGF2RP11717 2491 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 PRSS37A4D1T9 235 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 C1QTNF9BB2RNN3 333 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 EFSO43281 561 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 LRRTM2O43300 516 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 ZIC3O60481 467 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 AKR7A3O95154 331 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 IGHMP01871 453 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 C1QTNF9P0C862 333 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 HLA-DOBP13765 273 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 WT1P19544 449 aaPredicted RBP11.3□□□□□ -0.6
SSH2-203ENST00000394848 CAPZA2P47755 286 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 BMXP51813 675 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 OC90Q02509 493 aaPredicted RBP11.3□□□□□ -0.6
SSH2-203ENST00000394848 SELENBP1Q13228 472 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 TMEM176BQ3YBM2 270 aaPredicted RBP11.3□□□□□ -0.6
SSH2-203ENST00000394848 EEF1A1P5Q5VTE0 462 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 LYPD4Q6UWN0 246 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 UNQ6494/PRO21346Q6UXR6 183 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 LINC00299Q6ZSB3 139 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 SSX6Q7RTT6 188 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 MCFD2Q8NI22 146 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 C5orf34Q96MH7 638 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 OR5B2Q96R09 309 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 UBL7Q96S82 380 aaPredicted RBP11.3□□□□□ -0.6
SSH2-203ENST00000394848 NUAK2Q9H093 628 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 TRIM36Q9NQ86 728 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 TXNL4BQ9NX01 149 aaKnown RBP11.3□□□□□ -0.6
SSH2-203ENST00000394848 PCNX3Q9H6A9 2034 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 ACACAQ13085 2346 aa11.3□□□□□ -0.6
SSH2-203ENST00000394848 A0A1W2PNR3 127 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 E9PI62 339 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 ZNF670-ZNF695F2Z2N8 137 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 RRP8O43159 456 aaKnown RBP11.29□□□□□ -0.6
SSH2-203ENST00000394848 INHBBP09529 407 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 SFTPDP35247 375 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 SOX6P35712 828 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 DNASE1L1P49184 302 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 OR2B6P58173 313 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 ACTA2P62736 377 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 ACTG2P63267 376 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 FABP5Q01469 135 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 DCTN2Q13561 401 aaKnown RBP11.29□□□□□ -0.6
SSH2-203ENST00000394848 ZNF404Q494X3 552 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 ABHD17BQ5VST6 288 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 C22orf42Q6IC83 251 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 CD200R1LQ6Q8B3 271 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
SSH2-203ENST00000394848 SLC16A9Q7RTY1 509 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 SPACA3Q8IXA5 215 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 THAP4Q8WY91 577 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
SSH2-203ENST00000394848 DACH2Q96NX9 599 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 TMED9Q9BVK6 235 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 MMP27Q9H306 513 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 SIAEQ9HAT2 523 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 PLGRKTQ9HBL7 147 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 DKKL1Q9UK85 242 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 ZMIZ1Q9ULJ6 1067 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 HDGFL3Q9Y3E1 203 aa11.29□□□□□ -0.6
SSH2-203ENST00000394848 SIRT4Q9Y6E7 314 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms