RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ADOQ96SZ5 270 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 EMC7Q9NPA0 242 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 IKZF2Q9UKS7 526 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ING4Q9UNL4 249 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF281Q9Y2X9 895 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 U3KQ87 197 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 RHPN2P1A8MT19 583 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 C11orf98E9PRG8 122 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 EFNB2P52799 333 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 OR1D5P58170 312 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 STARD6P59095 220 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 RPL18Q07020 188 aaKnown RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 CD276Q5ZPR3 534 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 STAC2Q6ZMT1 411 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 DPY19L4Q7Z388 723 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 ATG4DQ86TL0 474 aaPredicted RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 GLB1L2Q8IW92 636 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 LRRC75AQ8NAA5 344 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 C1orf216Q8TAB5 229 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 TSPAN32Q96QS1 320 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 OR2M2Q96R28 347 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 OR8D2Q9GZM6 311 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 NANSQ9NR45 359 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 EIF3KQ9UBQ5 218 aaKnown RBP12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 PLCL2Q9UPR0 1127 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 FOXJ3Q9UPW0 622 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 RNF215Q9Y6U7 377 aa12.24□□□□□ -0.45
GTF2F1-201ENST00000394456 PCNX3Q9H6A9 2034 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 EFCAB7A8K855 629 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 C17orf105B2RV13 164 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 AIPO00170 330 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 NOS1APO75052 506 aaPredicted RBP12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 WNT11O96014 354 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 UBE2MP61081 183 aaKnown RBP12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 DMWDQ09019 674 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 C14orf28Q4W4Y0 310 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 ALG10Q5BKT4 473 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 SLC25A25Q6KCM7 469 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 SLC35D2Q76EJ3 337 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 FAM109AQ8N4B1 249 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 OR2T35Q8NGX2 323 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 OR6N2Q8NGY6 317 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 TAAR8Q969N4 342 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 GAL3ST1Q99999 423 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 MESP1Q9BRJ9 268 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 SYT4Q9H2B2 425 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 PDE7BQ9NP56 450 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 COQ3Q9NZJ6 369 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 ELF5Q9UKW6 265 aaPredicted RBP12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 MRPS33Q9Y291 106 aaKnown RBP12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 SLC6A5Q9Y345 797 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 PCDHGA5Q9Y5G8 931 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 V9GY05 133 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 TMEM265A0A087WTH1 108 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 MEIKINA0A087WXM9 373 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 TLCD2A6NGC4 264 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 ARPC3O15145 178 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 GATBO75879 557 aaKnown RBP12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 NSA2O95478 260 aaKnown RBP12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 DNASE1P24855 282 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 P2RX1P51575 399 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 PITPNAQ00169 270 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 LGALS3BPQ08380 585 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 FUT7Q11130 342 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 SKP2Q13309 424 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 LINC00303Q3SY05 128 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 JAZF1Q86VZ6 243 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 TMPRSS12Q86WS5 348 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 PTPMT1Q8WUK0 201 aaPredicted RBP12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 GAL3ST4Q96RP7 486 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 MMP25Q9NPA2 562 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 STMN3Q9NZ72 180 aa12.23□□□□□ -0.45
GTF2F1-201ENST00000394456 FER1L5A0AVI2 2057 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 GSTZ1O43708 216 aaPredicted RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 KHDRBS3O75525 346 aaKnown RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 PIAS2O75928 621 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 SLC22A5O76082 557 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ABHD16AO95870 558 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 RAF1P04049 648 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 TACR3P29371 465 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 OC90Q02509 493 aaPredicted RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 FNDC7Q5VTL7 733 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 NHLRC1Q6VVB1 395 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ZNF767PQ75MW2 155 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 MDGA2Q7Z553 956 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 C17orf82Q86X59 251 aaPredicted RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 PM20D2Q8IYS1 436 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ELMOD2Q8IZ81 293 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 OR4D10Q8NGI6 311 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 G6PC3Q9BUM1 346 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 C1QTNF6Q9BXI9 259 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 DHCR7Q9UBM7 475 aaKnown RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ASCC3Q8N3C0 2202 aaKnown RBP12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 CLDN4O14493 209 aa12.22□□□□□ -0.45
GTF2F1-201ENST00000394456 ICOSLGO75144 302 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms