RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 BHLHE40O14503 412 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 GPR4P46093 362 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SCAND1P57086 179 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 TAS2R60P59551 318 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 PRDX1Q06830 199 aaKnown RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 INPP5JQ15735 1006 aaPredicted RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 RPE65Q16518 533 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 C4orf46Q504U0 113 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SZRD1Q7Z422 152 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SFTPA1Q8IWL2 248 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 LNX2Q8N448 690 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 SMPDL3BQ92485 455 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 AMDHD1Q96NU7 426 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 GLIPR2Q9H4G4 154 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 ZCCHC3Q9NUD5 404 aaKnown RBP17.24■□□□□ 0.35
HOXC6-202ENST00000394331 COMMD9Q9P000 198 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 UPB1Q9UBR1 384 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 ZNF337Q9Y3M9 751 aa17.24■□□□□ 0.35
HOXC6-202ENST00000394331 TCF20Q9UGU0 1960 aaKnown RBP17.23■□□□□ 0.35
HOXC6-202ENST00000394331 AP4M1O00189 453 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 SULT2B1O00204 365 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 SLC31A2O15432 143 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 GPRIN2O60269 458 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 ITGB2P05107 769 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 CHRM4P08173 479 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 NTSP30990 170 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 SDHAP31040 664 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 PCGF3Q3KNV8 242 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 ANGPTL5Q86XS5 388 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 LINC01555Q8NAE3 123 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 KLHL31Q9H511 634 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 OR5V1Q9UGF6 321 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 LHX6Q9UPM6 363 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 PIP5K1CO60331 668 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 FADS1O60427 444 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 ZGLP1P0C6A0 271 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 HOXA6P31267 233 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 RAB5CP51148 216 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 ACTA2P62736 377 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 ACTG2P63267 376 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 SSBP1Q04837 148 aaKnown RBP17.23■□□□□ 0.35
HOXC6-202ENST00000394331 C9orf152Q5JTZ5 239 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 RPL22L1Q6P5R6 122 aaKnown RBP17.23■□□□□ 0.35
HOXC6-202ENST00000394331 SSX9Q7RTT3 188 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 NRMQ8IXM6 262 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 C14orf79Q96F83 325 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 ASB16Q96NS5 453 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 OR14A2Q96R54 314 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 CMC2Q9NRP2 79 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 C2orf42Q9NWW7 574 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 PPP4R1LQ9P1A2 415 aa17.23■□□□□ 0.35
HOXC6-202ENST00000394331 A0A1W2PPK0 400 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 CD74P04233 296 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 SLC2A5P22732 501 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 SPCS3P61009 180 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 RAB4BP61018 213 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 IRF4Q15306 451 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 PNLIPRP3Q17RR3 467 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 GFOD2Q3B7J2 385 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 DNLZQ5SXM8 178 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 SMARCD2Q92925 531 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 MED20Q9H944 212 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 DZANK1Q9NVP4 752 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 A0A1W2PPE3 182 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 AKAIN1P0CW23 69 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 PDGFRLQ15198 375 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 ZCCHC12Q6PEW1 402 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 TMEM64Q6YI46 380 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 RHOUQ7L0Q8 258 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 AMER3Q8N944 861 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 STEAP2Q8NFT2 490 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 OR52L1Q8NGH7 329 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 ZFPM2Q8WW38 1151 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 OCSTAMPQ9BR26 566 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 HCAR1Q9BXC0 346 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 KCNK12Q9HB15 430 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 THAP10Q9P2Z0 257 aaPredicted RBP17.22■□□□□ 0.35
HOXC6-202ENST00000394331 V9GY05 133 aa17.22■□□□□ 0.35
HOXC6-202ENST00000394331 CPSF4LA6NMK7 179 aaKnown RBP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 OR2AT4A6NND4 320 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 F5H0A9 414 aaPredicted RBP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 OR2T1O43869 369 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 ANXA2P07355 339 aaKnown RBP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 SFTPCP11686 197 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 TPT1P13693 172 aaKnown RBP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 HLA-GP17693 338 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 RAB28P51157 221 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 NCBP2P52298 156 aaKnown RBP eCLIP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 FUT5Q11128 374 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 SLC9A5Q14940 896 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 LBHQ53QV2 105 aaPredicted RBP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 OR5AP2Q8NGF4 316 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 DUSP19Q8WTR2 217 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 C14orf144Q96I85 54 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 TMEM68Q96MH6 324 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 MESP1Q9BRJ9 268 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 SFXN1Q9H9B4 322 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 FBXL4Q9UKA2 621 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 A0A0G2JN53 185 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 FAM86C2PA6NEL3 165 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms