RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 APOA1P02647 267 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 UMODP07911 640 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 CD53P19397 219 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 ZFP36L1Q07352 338 aaKnown RBP13.59□□□□□ -0.23
GPC3-202ENST00000394299 OR7A5Q15622 319 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 CEP78Q5JTW2 689 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 EEF1A1P5Q5VTE0 462 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 SLC23A3Q6PIS1 610 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 RDH10Q8IZV5 341 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 Q8N402 240 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 RGP1Q92546 391 aaPredicted RBP13.59□□□□□ -0.23
GPC3-202ENST00000394299 C11orf54Q9H0W9 315 aaPredicted RBP13.59□□□□□ -0.23
GPC3-202ENST00000394299 TMEM185BQ9H7F4 350 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
GPC3-202ENST00000394299 A0A0G2JMP0 313 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 A0A0X1KG70 313 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 ANKUB1A6NFN9 424 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 FTCDNL1E5RQL4 147 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 SLC16A7O60669 478 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 UPK3AO75631 287 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 OR6A2O95222 327 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 MPZL1O95297 269 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 AHSA1O95433 338 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 RPL27P61353 136 aaKnown RBP13.58□□□□□ -0.24
GPC3-202ENST00000394299 MEP1BQ16820 701 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 EMC4Q5J8M3 183 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 MZT2AQ6P582 158 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 SLC35D2Q76EJ3 337 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 NUP54Q7Z3B4 507 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 GLCCI1Q86VQ1 547 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 CDC20BQ86Y33 519 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 YIPF7Q8N8F6 280 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 SAMD12Q8N8I0 201 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 AGBL5Q8NDL9 886 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 IL17RDQ8NFM7 739 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 OR4M2Q8NGB6 313 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 RASL10BQ96S79 203 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 DEFB126Q9BYW3 111 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 ULBP3Q9BZM4 244 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 SLC25A18Q9H1K4 315 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 SLC26A1Q9H2B4 701 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 NOX4Q9NPH5 578 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 EXTL2Q9UBQ6 330 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 KCNG2Q9UJ96 466 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 FBXL2Q9UKC9 423 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 IKZF2Q9UKS7 526 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 B9D1Q9UPM9 204 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 MOKQ9UQ07 419 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.24
GPC3-202ENST00000394299 MS4A18H0YCH9 400 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 XKRYO14609 159 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 TFECO14948 347 aaPredicted RBP13.58□□□□□ -0.24
GPC3-202ENST00000394299 YKT6O15498 198 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 CTLA4P16410 223 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 RAB3BP20337 219 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 SCN1BQ07699 218 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 IL11RAQ14626 422 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 PCOLCEQ15113 449 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 TRAM1Q15629 374 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 MS4A18Q3C1V0 323 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 PRAMEF20Q5VT98 475 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 GPR139Q6DWJ6 353 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 GDPD1Q8N9F7 314 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 OR5L2Q8NGL0 311 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 ARRDC1-AS1Q9H2J1 176 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 FRRS1LQ9P0K9 344 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 LAMP5Q9UJQ1 280 aa13.58□□□□□ -0.24
GPC3-202ENST00000394299 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 PRSS37A4D1T9 235 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 KLF7O75840 302 aaPredicted RBP13.57□□□□□ -0.24
GPC3-202ENST00000394299 MT-ATP6P00846 226 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
GPC3-202ENST00000394299 ATF1P18846 271 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 GALNT6Q8NCL4 622 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 OR4M1Q8NGD0 313 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 ZNF519Q8TB69 540 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 PPP1R14AQ96A00 147 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 MAP6Q96JE9 813 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 METTL7AQ9H8H3 244 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 PPP4R1LQ9P1A2 415 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 TFPIP10646 304 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 CD97P48960 835 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 TPTEP56180 551 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 ESPNLQ6ZVH7 1005 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 DTWD2Q8NBA8 298 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 TRMT10AQ8TBZ6 339 aaKnown RBP13.57□□□□□ -0.24
GPC3-202ENST00000394299 TMEM234Q8WY98 164 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 TXNIPQ9H3M7 391 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 MED29Q9NX70 200 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 SLCO1C1Q9NYB5 712 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 GPN3Q9UHW5 284 aaPredicted RBP13.57□□□□□ -0.24
GPC3-202ENST00000394299 PCDHGB2Q9Y5G2 931 aa13.57□□□□□ -0.24
GPC3-202ENST00000394299 EXPH5Q8NEV8 1989 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 ZNF593O00488 134 aaPredicted RBP13.56□□□□□ -0.24
GPC3-202ENST00000394299 LANCL1O43813 399 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 ABHD16AO95870 558 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 KLK3P07288 261 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms