RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SPTA1P02549 2419 aa21.63■■□□□ 1.05
LRFN4-202ENST00000393952 ZNF716A6NP11 495 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 PRR23D1E9PI22 279 aaPredicted RBP21.62■■□□□ 1.05
LRFN4-202ENST00000393952 H7C1C5 153 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 AQP8O94778 261 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 PRR23D2P0DMB1 279 aaPredicted RBP21.62■■□□□ 1.05
LRFN4-202ENST00000393952 ACVR2AP27037 513 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 BIDP55957 195 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 LCN6P62502 163 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 ST3GAL2Q16842 350 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 SLC25A30Q5SVS4 291 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 AADACL4Q5VUY2 407 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 CREB3L2Q70SY1 520 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 BPIFB6Q8NFQ5 453 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 RNF128Q8TEB7 428 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 PTP4A1Q93096 173 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 ZNF582Q96NG8 517 aaPredicted RBP21.62■■□□□ 1.05
LRFN4-202ENST00000393952 ASF1BQ9NVP2 202 aa21.62■■□□□ 1.05
LRFN4-202ENST00000393952 SPENQ96T58 3664 aaKnown RBP21.62■■□□□ 1.05
LRFN4-202ENST00000393952 OR6C68A6NDL8 312 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 KDM4EB2RXH2 506 aaPredicted RBP21.61■■□□□ 1.05
LRFN4-202ENST00000393952 SLC1A7O00341 560 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 XKRYO14609 159 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 XPNPEP2O43895 674 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 RPSAP08865 295 aaKnown RBP21.61■■□□□ 1.05
LRFN4-202ENST00000393952 CLDN17P56750 224 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 RASGEF1BQ0VAM2 473 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 SLX1AQ9BQ83 275 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 PRRG4Q9BZD6 226 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 A6NIZ1 184 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 PAICSP22234 425 aaKnown RBP21.61■■□□□ 1.05
LRFN4-202ENST00000393952 PTGS2P35354 604 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 RAP1BP61224 184 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 RAP1AP62834 184 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 MEDAGQ5VYS4 303 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 FAM205BPQ63HN1 556 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 ADCK1Q86TW2 530 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 ZIC4Q8N9L1 334 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 OR9Q1Q8NGQ5 310 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 ZNF775Q96BV0 537 aaPredicted RBP21.61■■□□□ 1.05
LRFN4-202ENST00000393952 Q96MT0 163 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 ZNF385AQ96PM9 386 aaKnown RBP21.61■■□□□ 1.05
LRFN4-202ENST00000393952 AMBNQ9NP70 447 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 ING1Q9UK53 422 aaPredicted RBP21.61■■□□□ 1.05
LRFN4-202ENST00000393952 FLVCR1Q9Y5Y0 555 aa21.61■■□□□ 1.05
LRFN4-202ENST00000393952 NBEAQ8NFP9 2946 aa21.6■■□□□ 1.05
LRFN4-202ENST00000393952 SLC35F4A4IF30 521 aa21.6■■□□□ 1.05
LRFN4-202ENST00000393952 SLC22A20A6NK97 555 aa21.6■■□□□ 1.05
LRFN4-202ENST00000393952 SLC16A1P53985 500 aa21.6■■□□□ 1.05
LRFN4-202ENST00000393952 ADGRE4PQ86SQ3 457 aa21.6■■□□□ 1.05
LRFN4-202ENST00000393952 MYRFQ9Y2G1 1151 aa21.6■■□□□ 1.05
LRFN4-202ENST00000393952 PRSS37A4D1T9 235 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 FAM20BO75063 409 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 TRMUO75648 421 aaKnown RBP21.59■■□□□ 1.05
LRFN4-202ENST00000393952 TGM6O95932 706 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 CLUP10909 449 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 CXCR4P61073 352 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 RBM48Q5RL73 367 aaKnown RBP21.59■■□□□ 1.05
LRFN4-202ENST00000393952 NXNL2Q5VZ03 156 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 NIPAL3Q6P499 406 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 NMNAT2Q9BZQ4 307 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 ZNF175Q9Y473 711 aa21.59■■□□□ 1.05
LRFN4-202ENST00000393952 SH3D21A4FU49 640 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 RENP00797 406 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 GYPBP06028 91 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 CAMK2DQ13557 499 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 SYT14Q8NB59 555 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 OR6X1Q8NH79 312 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 ZNF566Q969W8 418 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 SNX18Q96RF0 628 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 TRIB1Q96RU8 372 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 RHNO1Q9BSD3 238 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 YTHDF1Q9BYJ9 559 aaKnown RBP21.58■■□□□ 1.05
LRFN4-202ENST00000393952 SYT4Q9H2B2 425 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 OR51V1Q9H2C8 321 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 RPRD1BQ9NQG5 326 aaKnown RBP21.58■■□□□ 1.05
LRFN4-202ENST00000393952 KLHL9Q9P2J3 617 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 CLCF1Q9UBD9 225 aa21.58■■□□□ 1.05
LRFN4-202ENST00000393952 IGKV3D-15A0A087WSY6 115 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 TTLL8A6PVC2 850 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 PRODHO43272 600 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 TPOP07202 933 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 LYNP07948 512 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 CCDC159P0C7I6 412 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 CRHBPP24387 322 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 CDH11P55287 796 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 CARD17Q5XLA6 110 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 ZNF585AQ6P3V2 769 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 SLC25A44Q96H78 314 aaPredicted RBP21.57■■□□□ 1.04
LRFN4-202ENST00000393952 ADAD1Q96M93 576 aaKnown RBP21.57■■□□□ 1.04
LRFN4-202ENST00000393952 TSSK2Q96PF2 358 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 KCNK17Q96T54 332 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 ASB6Q9NWX5 421 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 VSX1Q9NZR4 365 aaPredicted RBP21.57■■□□□ 1.04
LRFN4-202ENST00000393952 H2AFY2Q9P0M6 372 aaPredicted RBP21.57■■□□□ 1.04
LRFN4-202ENST00000393952 CLEC4AQ9UMR7 237 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 SLC22A23A1A5C7 686 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 ZNF726A6NNF4 738 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 AHRRA9YTQ3 701 aa21.57■■□□□ 1.04
LRFN4-202ENST00000393952 TNFAIP8O95379 198 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms