RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LAPTM4AQ15012 233 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRAM2Q15035 370 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 SEC23BQ15437 767 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 FXNQ16595 210 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF672Q499Z4 452 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 FGD3Q5JSP0 725 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 KLHL24Q6TFL4 600 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF730Q6ZMV8 503 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 HIST3H2AQ7L7L0 130 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 P2RY8Q86VZ1 359 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 KRTAP1-3Q8IUG1 177 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 C17orf78Q8N4C9 275 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 CLDN22Q8N7P3 220 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 SYT14Q8NB59 555 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 C1orf162Q8NEQ5 155 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 WFDC11Q8NEX6 87 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR13C2Q8NGS9 318 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR6N1Q8NGY5 312 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR52J3Q8NH60 311 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR51A7Q8NH64 312 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 BCAS4Q8TDM0 211 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 HIST1H2ACQ93077 130 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 GTPBP3Q969Y2 492 aaKnown RBP6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 BPIFA2Q96DR5 249 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 PERPQ96FX8 193 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 C7orf34Q96L11 122 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 FOXC2Q99958 501 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 ULBP2Q9BZM5 246 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 NOX3Q9HBY0 568 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 NGBQ9NPG2 151 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 NDUFAF4Q9P032 175 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 MAGEL2Q9UJ55 1249 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 RPS6KA6Q9UK32 745 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 SAMD4AQ9UPU9 718 aaKnown RBP6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 LAMP3Q9UQV4 416 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 AMDHD2Q9Y303 409 aa6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 MAGED1Q9Y5V3 778 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P1-201ENST00000393368 CCDC168Q8NDH2 2452 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR6C65A6NJZ3 312 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF99A8MXY4 864 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 EFCAB9A8MZ26 197 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 E7EQL1 145 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ATP6V1G2-DDX39BF2Z307 99 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 RPL36A-HNRNPH2H7BZ11 118 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 CDC42EP2O14613 210 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 UBOX5O94941 541 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 HLA-HP01893 362 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 SEMG1P04279 462 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 H1F0P07305 194 aaKnown RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PATE4P0C8F1 98 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PGA4P0DJD7 388 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PGA3P0DJD8 388 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 SAGP10523 405 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF26P17031 533 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 CALB2P22676 271 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 CDKN1AP38936 164 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PRPS1P60891 318 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 UBE2NP61088 152 aaKnown RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PRKCDQ05655 676 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PIGFQ07326 219 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZP4Q12836 540 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 FHL1Q13642 323 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 IQCCQ4KMZ1 466 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ANKRD16Q6P6B7 361 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PODNL1Q6PEZ8 512 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC22A25Q6T423 547 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 KLHL17Q6TDP4 642 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 TMEM108Q6UXF1 575 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 C20orf204Q6ZNR8 217 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 MBOAT2Q6ZWT7 520 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ABHD12BQ7Z5M8 362 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 CYP4Z1Q86W10 505 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC7A13Q8TCU3 470 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ASB10Q8WXI3 467 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ACOT11Q8WXI4 607 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 TMEM54Q969K7 222 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 FBXW5Q969U6 566 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 CCDC124Q96CT7 223 aaKnown RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 MBD6Q96DN6 1003 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 PYURFQ96I23 114 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 FAM46AQ96IP4 442 aaKnown RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 RADILQ96JH8 1075 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 NSMCE2Q96MF7 247 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 HS6ST2Q96MM7 605 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ALPK1Q96QP1 1244 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 TNFRSF13CQ96RJ3 184 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF347Q96SE7 839 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 USB1Q9BQ65 265 aaKnown RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 CXXC4Q9H2H0 198 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 GORASP2Q9H8Y8 452 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 NMNAT1Q9HAN9 279 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 INIPQ9NRY2 104 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 CISD1Q9NZ45 108 aaKnown RBP6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 IL20RAQ9UHF4 553 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 POU2F3Q9UKI9 436 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 MOKQ9UQ07 419 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 MPDZO75970 2070 aa6.69□□□□□ -1.34
HMGB3P1-201ENST00000393368 ARPC4-TTLL3A0A0A6YYG9 625 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGKV1D-43A0A0B4J1Z2 117 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 A0A1W2PRG6 482 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms