RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 RNF128Q8TEB7 428 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 EID2BQ96D98 161 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 THOC3Q96J01 351 aaKnown RBP11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 LRRC3BQ96PB8 259 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 OR5M11Q96RB7 305 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 SLC19A3Q9BZV2 496 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 MMP28Q9H239 520 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 D6RAR5 112 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 OR8G3PP0DMU2 310 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 MAKP20794 623 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 LSSP48449 732 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 DUSP8Q13202 625 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 RAB31Q13636 194 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 KDM4DQ6B0I6 523 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 OR52N1Q8NH53 320 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 SYNPRQ8TBG9 265 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 GAB3Q8WWW8 586 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 NICN1Q9BSH3 213 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 MYOTQ9UBF9 498 aa11.94□□□□□ -0.5
PTPRN2-203ENST00000389418 HPGDSO60760 199 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 UBCP0CG48 685 aaKnown RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 MMP11P24347 488 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 MAP2K6P52564 334 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 SNRPGP62308 76 aaKnown RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 FOXC1Q12948 553 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 TRA2AQ13595 282 aaKnown RBP eCLIP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 GOT1L1Q8NHS2 421 aaPredicted RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ST8SIA1Q92185 356 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF419Q96HQ0 510 aaPredicted RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 OR2B2Q9GZK3 357 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 C12orf49Q9H741 205 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 OR2S2Q9NQN1 319 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 YARS2Q9Y2Z4 477 aaKnown RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 GAPDHSO14556 408 aaPredicted RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 SEC14L2O76054 403 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 WNT11O96014 354 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 BIDP55957 195 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 TAS2R19P59542 299 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 NKPD1Q17RQ9 610 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 Q499Y3 187 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF836Q6ZNA1 936 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 BATF2Q8N1L9 274 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 OR56B1Q8NGI3 324 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZC3HAV1LQ96H79 300 aaKnown RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 LRRC61Q9BV99 259 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 UBQLN2Q9UHD9 624 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF223Q9UK11 482 aaPredicted RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 CACNG2Q9Y698 323 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 TDRD6O60522 2096 aaKnown RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 A0A1W2PQ09 198 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 TMEM72A0PK05 275 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 DBHP09172 617 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 PPP1CAP62136 330 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 EIF3IQ13347 325 aaKnown RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 SLC22A6Q4U2R8 563 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 EMC4Q5J8M3 183 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 LINC00346Q8IVM7 164 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 GJC3Q8NFK1 279 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZFAND1Q8TCF1 268 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ITPKCQ96DU7 683 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF582Q96NG8 517 aaPredicted RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 THAP7Q9BT49 309 aaPredicted RBP11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 ARL6Q9H0F7 186 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 UBQLN3Q9H347 655 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 OR51B4Q9Y5P0 310 aa11.93□□□□□ -0.5
PTPRN2-203ENST00000389418 TNFSF15O95150 251 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 NME1P15531 152 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF44P15621 663 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 HTR2AP28223 471 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 KIF18BQ86Y91 864 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 OR5D18Q8NGL1 313 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 NT5CQ8TCD5 201 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 SLCO4A1Q96BD0 722 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 NMNAT3Q96T66 252 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 REV1Q9UBZ9 1251 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 C4orf47A7E2U8 309 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 SOCS6O14544 535 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 TAS2R46P59540 309 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 ANKRD34AQ69YU3 496 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 MOB3CQ70IA8 216 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 FAM57BQ71RH2 274 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 PGAP1Q75T13 922 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 CPEB2Q7Z5Q1 589 aaKnown RBP11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 ZNF695Q8IW36 515 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 KCNG3Q8TAE7 436 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 LAT2Q9GZY6 243 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 CHRNA9Q9UGM1 479 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 IGLV3-16A0A075B6K0 115 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 GABRPO00591 440 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 GLCEO94923 617 aa11.92□□□□□ -0.5
PTPRN2-203ENST00000389418 CNOT4O95628 575 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms