RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 PTX3P26022 381 aaPredicted RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 PPP2R1BP30154 601 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 BRS3P32247 399 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 APLNRP35414 380 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SKIV2L2P42285 1042 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 DYNLT3P51808 116 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 P2RX3P56373 397 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 YWHAZP63104 245 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 CLCQ05315 142 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC34A1Q06495 639 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 RAB40BQ12829 278 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 HERC3Q15034 1050 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 PTGES3Q15185 160 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 RBBP5Q15291 538 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 RALBP1Q15311 655 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 FCN2Q15485 313 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZRSR1Q15695 479 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 CD300EQ496F6 205 aaPredicted RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 PDCD4Q53EL6 469 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 TM4SF20Q53R12 229 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 RBM20Q5T481 1227 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 LGSNQ5TDP6 509 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 NIPAL1Q6NVV3 410 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF529Q6P280 563 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 FDX2Q6P4F2 183 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 TTC23LQ6PF05 361 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 DCDC5Q6ZRR9 648 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 LINC00173Q6ZV60 143 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 BEND5Q7L4P6 421 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 DET1Q7L5Y6 550 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC35E3Q7Z769 313 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 MYPOPQ86VE0 399 aaPredicted RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 C1orf87Q8N0U7 546 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZCCHC7Q8N3Z6 543 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 RAB42Q8N4Z0 105 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF491Q8N8L2 437 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 GBP7Q8N8V2 638 aaPredicted RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 Q8NAQ8 132 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF397Q8NF99 534 aaPredicted RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR52E4Q8NGH9 312 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR5D13Q8NGL4 314 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR9G4Q8NGQ1 327 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR1B1Q8NGR6 318 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC2A12Q8TD20 617 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 DYNLRB2Q8TF09 96 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 GTSF1Q8WW33 167 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 OIT3Q8WWZ8 545 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 GTF2H4Q92759 462 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 FOXRED1Q96CU9 486 aaPredicted RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SAAL1Q96ER3 474 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF799Q96GE5 643 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR2A5Q96R48 311 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF382Q96SR6 550 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 NPAS1Q99742 590 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 CPNE1Q99829 537 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC25A33Q9BSK2 321 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 LACRTQ9GZZ8 138 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 LSG1Q9H089 658 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 QRSL1Q9H0R6 528 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SDCBP2Q9H190 292 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 GNB4Q9HAV0 340 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 CLK4Q9HAZ1 481 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 GALNT9Q9HCQ5 603 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SNX15Q9NRS6 342 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 ASNSD1Q9NWL6 643 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 PIH1D1Q9NWS0 290 aaKnown RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 PARPBPQ9NWS1 579 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 EMC3Q9P0I2 261 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 CRNNQ9UBG3 495 aaPredicted RBP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 GIMAP2Q9UG22 337 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 TSPAN16Q9UKR8 245 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 RASD1Q9Y272 281 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 PPIL1Q9Y3C6 166 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 SNX10Q9Y5X0 201 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 PUS1Q9Y606 427 aaKnown RBP eCLIP0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 STYXL1Q9Y6J8 313 aa0.56□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGLV1-50A0A075B6I6 118 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGLV3-10A0A075B6K4 115 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 A0A096LPK6 155 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 TRAV5A0A0B4J249 113 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 A0A0J9YW62 118 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR2A25A4D2G3 310 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 PRAMEF25A6NGN4 478 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 RTCAO00442 366 aaKnown RBP0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 NR5A2O00482 541 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 PHOX2AO14813 284 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 SIVA1O15304 175 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 ANP32CO43423 234 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 ADAM20O43506 726 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 NDUFA2O43678 99 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 RRP9O43818 475 aaKnown RBP0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 AIREO43918 545 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 KIF5CO60282 957 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 SKAP2O75563 359 aaPredicted RBP0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR2F2O95006 317 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 PGLSO95336 258 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 AP2A1O95782 977 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 AIFM1O95831 613 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGKV3-15P01624 115 aa0.55□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGHG4P01861 327 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms