RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 TRA2BP62995 288 aaKnown RBP17.32■□□□□ 0.36
CSPG5-202ENST00000383738 ARFRP1Q13795 201 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 C16orf47Q6ZP98 133 aaPredicted RBP17.32■□□□□ 0.36
CSPG5-202ENST00000383738 KCTD20Q7Z5Y7 419 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 SLC35A4Q96G79 324 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 PITHD1Q9GZP4 211 aaPredicted RBP17.32■□□□□ 0.36
CSPG5-202ENST00000383738 MYO16Q9Y6X6 1858 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 GPR171O14626 319 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 HTR2AP28223 471 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 LTBRP36941 435 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 LSSP48449 732 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 ZNF101Q8IZC7 436 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 SIRT6Q8N6T7 355 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 OR4N2Q8NGD1 307 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 OR5M1Q8NGP8 315 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 VWCEQ96DN2 955 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 PRRC1Q96M27 445 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 LINC00052Q96N35 136 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 PLEKHB1Q9UF11 243 aaPredicted RBP17.32■□□□□ 0.36
CSPG5-202ENST00000383738 ADAM29Q9UKF5 820 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 TRIM64A6NGJ6 449 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 HMGN4O00479 90 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 CCSO14618 274 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 SOD1P00441 154 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 LALBAP00709 142 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 SLC35F3Q8IY50 421 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 STT3BQ8TCJ2 826 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 RADILQ96JH8 1075 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 HINT3Q9NQE9 182 aaKnown RBP17.32■□□□□ 0.36
CSPG5-202ENST00000383738 KLK11Q9UBX7 282 aa17.32■□□□□ 0.36
CSPG5-202ENST00000383738 PIAS2O75928 621 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 P04436 131 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 CFL1P23528 166 aaKnown RBP17.31■□□□□ 0.36
CSPG5-202ENST00000383738 S100A11P31949 105 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 CAPZBP47756 277 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 GPR143P51810 404 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 DLX5P56178 289 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 WNT3P56703 355 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 OR7A5Q15622 319 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 ABHD17BQ5VST6 288 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 GLT8D1Q68CQ7 371 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 IFI44Q8TCB0 444 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 SYT4Q9H2B2 425 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 FN3KQ9H479 309 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 SH3BGRL2Q9UJC5 107 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 PI4KAP42356 2102 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 CDHR4A6H8M9 788 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 IDSB3KWA1 339 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 LUMP51884 338 aaPredicted RBP17.31■□□□□ 0.36
CSPG5-202ENST00000383738 DCDP81605 110 aaKnown RBP17.31■□□□□ 0.36
CSPG5-202ENST00000383738 CRMP1Q14194 572 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 C9orf135Q5VTT2 229 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 ZNF227Q86WZ6 799 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 DNAAF1Q8NEP3 725 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 OR52I2Q8NH67 350 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 SLC22A8Q8TCC7 542 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 COX14Q96I36 57 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 BTBD2Q9BX70 525 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 EMC7Q9NPA0 242 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 GALR3O60755 368 aaPredicted RBP17.31■□□□□ 0.36
CSPG5-202ENST00000383738 ALOX12BO75342 701 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 PRAMEF8Q5VWM4 474 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 PRAMEF7Q5VXH5 474 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 ZNF595Q8IYB9 648 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 WNT16Q9UBV4 365 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 ASB4Q9Y574 426 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 MIA3Q5JRA6 1907 aa17.31■□□□□ 0.36
CSPG5-202ENST00000383738 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 KRBOX1C9JBD0 128 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 LANCL1O43813 399 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 SSX5O60225 188 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 CPEP16870 476 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 PSMA3P25788 255 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 HSD11B1P28845 292 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 CMIPQ8IY22 773 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 MAFIPQ8WZ33 124 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 ORAI3Q9BRQ5 295 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 CTNSO60931 367 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 AK1P00568 194 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 MAGEB1P43366 347 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 TEKQ02763 1124 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 MARCH3Q86UD3 253 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 HAVCR2Q8TDQ0 301 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 TNFRSF13CQ96RJ3 184 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 RAB19A4D1S5 217 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 ZNF616Q08AN1 781 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 METAP1DQ6UB28 335 aaPredicted RBP17.3■□□□□ 0.36
CSPG5-202ENST00000383738 FAM46BQ96A09 425 aa17.3■□□□□ 0.36
CSPG5-202ENST00000383738 GLULP15104 373 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 RBM34P42696 430 aaKnown RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 SNRPGP62308 76 aaKnown RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 ACOT11Q8WXI4 607 aaPredicted RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 ATF6BQ99941 703 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 UBQLN4Q9NRR5 601 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 TRAPPC4Q9Y296 219 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 GREB1Q4ZG55 1949 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 AGAP14A8MT82 685 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 DLSTP36957 453 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 RAE1P78406 368 aaKnown RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 TLE3Q04726 772 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms