RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 EPHA1P21709 976 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 FOLR3P41439 243 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 MRPL19P49406 292 aaKnown RBP15.77■□□□□ 0.11
SGCB-201ENST00000381431 DGCR2P98153 550 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 HTR4Q13639 388 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 RUNX2Q13950 521 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 AGERQ15109 404 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 TMEM215Q68D42 235 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 FOXRED1Q96CU9 486 aaPredicted RBP15.77■□□□□ 0.11
SGCB-201ENST00000381431 SORCS2Q96PQ0 1159 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 CSF3RQ99062 836 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 SLC38A1Q9H2H9 487 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 ZDBF2Q9HCK1 2354 aa15.77■□□□□ 0.11
SGCB-201ENST00000381431 NSG1A0A0A6YYJ2 146 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 GJE1A6NN92 205 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 HRO43593 1189 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 CPEP16870 476 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 RPL35P42766 123 aaKnown RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 UBE2NP61088 152 aaKnown RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 NIPAL3Q6P499 406 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 EID2Q8N6I1 236 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 GLYATL2Q8WU03 294 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 FAM3DQ96BQ1 224 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 OBP2AQ9NY56 170 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 MBD1Q9UIS9 605 aaPredicted RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 THBS1P07996 1170 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 NFYAP23511 347 aaPredicted RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 SELENOVP59797 346 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 TMEM196Q5HYL7 178 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 STEAP1BQ6NZ63 245 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 SULF2Q8IWU5 870 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 ZG16BQ96DA0 208 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 GIMAP5Q96F15 307 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 OR6C1Q96RD1 312 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 OR10A2Q9H208 303 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 PAPLNO95428 1278 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 MSX1P28360 303 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 OR1D5P58170 312 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 BTN1A1Q13410 526 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 SLC36A2Q495M3 483 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 VWA2Q5GFL6 755 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 PIGCQ92535 297 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 FGGYQ96C11 551 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 SLIRPQ9GZT3 109 aaKnown RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 SPTBP11277 2137 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 TSPAN11A1L157 253 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 M0R082 166 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 BDKRB2P30411 391 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 CCR9P51686 369 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 CLDN17P56750 224 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 ZNF784Q8NCA9 323 aaPredicted RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 ATOH1Q92858 354 aaPredicted RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 MRGPRX1Q96LB2 322 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 DCLRE1CQ96SD1 692 aaKnown RBP15.76■□□□□ 0.11
SGCB-201ENST00000381431 NICN1Q9BSH3 213 aa15.76■□□□□ 0.11
SGCB-201ENST00000381431 TRPM6Q9BX84 2022 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 SMCO3A2RU48 225 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 DNAJB6O75190 326 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 OR7C1O76099 320 aaPredicted RBP15.75■□□□□ 0.11
SGCB-201ENST00000381431 F10P00742 488 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 HSD17B7P56937 341 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 TAS2R31P59538 309 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 RAE1P78406 368 aaKnown RBP15.75■□□□□ 0.11
SGCB-201ENST00000381431 RPL19P84098 196 aaKnown RBP15.75■□□□□ 0.11
SGCB-201ENST00000381431 DUSP8Q13202 625 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 Q6ZTK2 550 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 OR52I2Q8NH67 350 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 TMEM59Q9BXS4 323 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 NIPAL2Q9H841 368 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 ISG20L2Q9H9L3 353 aaKnown RBP15.75■□□□□ 0.11
SGCB-201ENST00000381431 IFNA2P01563 188 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 KIAA1024LP59773 190 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 TIAL1Q01085 375 aaKnown RBP eCLIP15.75■□□□□ 0.11
SGCB-201ENST00000381431 YIF1BQ5BJH7 314 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 OPN5Q6U736 354 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 RCBTB1Q8NDN9 531 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 IL1F10Q8WWZ1 152 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 DDOQ99489 341 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 DNTTIP1Q9H147 329 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 HRH4Q9H3N8 390 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 ADAMTSL1Q8N6G6 1762 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 HYAL3O43820 417 aaPredicted RBP15.75■□□□□ 0.11
SGCB-201ENST00000381431 C17orf67Q0P5P2 114 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 TPBGQ13641 420 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 EXOSC6Q5RKV6 272 aaKnown RBP15.75■□□□□ 0.11
SGCB-201ENST00000381431 OR5T1Q8NG75 326 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 HSD17B8Q92506 261 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 CTRCQ99895 268 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 C19orf43Q9BQ61 176 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 COA3Q9Y2R0 106 aaPredicted RBP15.75■□□□□ 0.11
SGCB-201ENST00000381431 PCDHGA1Q9Y5H4 931 aa15.75■□□□□ 0.11
SGCB-201ENST00000381431 B4DXG7 233 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 P2RX6O15547 441 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 DPM1O60762 260 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 GDF1P27539 372 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 MECP2P51608 486 aaKnown RBP15.74■□□□□ 0.11
SGCB-201ENST00000381431 ASAH1Q13510 395 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 AGBL4Q5VU57 503 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ZNF695Q8IW36 515 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms