RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 CPNE5Q9HCH3 593 aa13.56□□□□□ -0.24
SNX2-201ENST00000379516 SERINC1Q9NRX5 453 aa13.56□□□□□ -0.24
SNX2-201ENST00000379516 COMMD3Q9UBI1 195 aa13.56□□□□□ -0.24
SNX2-201ENST00000379516 TCFL5Q9UL49 500 aa13.56□□□□□ -0.24
SNX2-201ENST00000379516 ISPDA4D126 451 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 PRR32B1ATL7 298 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 MS4A18H0YCH9 400 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 EFNA2O43921 213 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 CBFA2T3O75081 653 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 IMPDH2P12268 514 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 HLA-DOBP13765 273 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 CENPAP49450 140 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 SSR4P51571 173 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 KIF26BQ2KJY2 2108 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 MS4A18Q3C1V0 323 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 H1FNTQ75WM6 255 aaPredicted RBP13.55□□□□□ -0.24
SNX2-201ENST00000379516 SLC22A16Q86VW1 577 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 WDSUB1Q8N9V3 476 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 OR5M1Q8NGP8 315 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 OR6N2Q8NGY6 317 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 CT55Q8WUE5 264 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 ATF6BQ99941 703 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 WDR76Q9H967 626 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 LAMP5Q9UJQ1 280 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 UGT2A1Q9Y4X1 527 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 COL27A1Q8IZC6 1860 aaPredicted RBP13.55□□□□□ -0.24
SNX2-201ENST00000379516 SC5DO75845 299 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 AKR7A3O95154 331 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 IGHMP01871 453 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 TGM1P22735 817 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 MAP2K6P52564 334 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 TLE3Q04726 772 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 SNTA1Q13424 505 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 C11orf91Q3C1V1 193 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 CCDC58Q4VC31 144 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 RPS19BP1Q86WX3 136 aaKnown RBP13.55□□□□□ -0.24
SNX2-201ENST00000379516 CDC20BQ86Y33 519 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 DIRAS2Q96HU8 199 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 FOXN4Q96NZ1 517 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 INTS14Q96SY0 518 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 SDHCQ99643 169 aaPredicted RBP13.55□□□□□ -0.24
SNX2-201ENST00000379516 POTEKPQ9BYX7 375 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 RNF32Q9H0A6 362 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 PTGES2Q9H7Z7 377 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 VSX1Q9NZR4 365 aaPredicted RBP13.55□□□□□ -0.24
SNX2-201ENST00000379516 KLHDC2Q9Y2U9 406 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 FKBP7Q9Y680 259 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 V9GYH0 126 aa13.55□□□□□ -0.24
SNX2-201ENST00000379516 SLC16A7O60669 478 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 DLGAP3O95886 979 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 SERPINA3P01011 423 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 HLA-DQA2P01906 255 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 OPN1LWP04000 364 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 ZNF806P0C7X5 589 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 MYL9P24844 172 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 RPS27P42677 84 aaKnown RBP13.54□□□□□ -0.24
SNX2-201ENST00000379516 FOXK1P85037 733 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 ZP4Q12836 540 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 ZMAT1Q5H9K5 638 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 ZNF684Q5T5D7 378 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 DPY19L4Q7Z388 723 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 FAM220AQ7Z4H9 259 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 PPP1R32Q7Z5V6 425 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 TMEM156Q8N614 296 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 FADS6Q8N9I5 356 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 SCAIQ8N9R8 606 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 POC5Q8NA72 575 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 MINDY2Q8NBR6 621 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 KLHL15Q96M94 604 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 C5orf34Q96MH7 638 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 PDCD1LG2Q9BQ51 273 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 EDEM2Q9BV94 578 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 DDA1Q9BW61 102 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 TMEM185BQ9H7F4 350 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 CHST11Q9NPF2 352 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 TBCCD1Q9NVR7 557 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 C14orf119Q9NWQ9 140 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
SNX2-201ENST00000379516 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 LIPT2A6NK58 231 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 RPP14O95059 124 aaKnown RBP13.54□□□□□ -0.24
SNX2-201ENST00000379516 TACSTD2P09758 323 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 OR8G3PP0DMU2 310 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 FAM131AQ6UXB0 335 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 PXKQ7Z7A4 578 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 OR8H2Q8N162 312 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 LIN37Q96GY3 246 aaPredicted RBP13.54□□□□□ -0.24
SNX2-201ENST00000379516 CCDC32Q9BV29 185 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 TSPAN10Q9H1Z9 355 aaPredicted RBP13.54□□□□□ -0.24
SNX2-201ENST00000379516 TMEM9BQ9NQ34 198 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 TRAPPC4Q9Y296 219 aa13.54□□□□□ -0.24
SNX2-201ENST00000379516 A0A1W2PPK0 400 aa13.53□□□□□ -0.24
SNX2-201ENST00000379516 A0A1W2PQ72 361 aa13.53□□□□□ -0.24
SNX2-201ENST00000379516 FABP12A6NFH5 140 aa13.53□□□□□ -0.24
SNX2-201ENST00000379516 C9orf172C9J069 976 aa13.53□□□□□ -0.24
SNX2-201ENST00000379516 NPIPA5E9PKD4 350 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms