RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CLPTM1O96005 669 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 ARFIP2P53365 341 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 MVDP53602 400 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 RGS7BPQ6MZT1 257 aaPredicted RBP15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 ACSM5Q6NUN0 579 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 TMEM154Q6P9G4 183 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 WDFY1Q8IWB7 410 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 TEX29Q8N6K0 151 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 C10orf53Q8N6V4 93 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 OR4M2Q8NGB6 313 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 ZBTB9Q96C00 473 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 TXNDC15Q96J42 360 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 ZNF75AQ96N20 296 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 TSPAN32Q96QS1 320 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 FOXB1Q99853 325 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 TMPRSS13Q9BYE2 586 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 TPT1P8Q9HAU6 139 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 SLC52A3Q9NQ40 469 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 ZNF224Q9NZL3 707 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 IFT52Q9Y366 437 aa15.21■□□□□ 0.03
PDLIM4-202ENST00000379018 TRAV36DV7A0A075B6V5 113 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 A0A0G2JPF8 293 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 A0A1B0GWA3 101 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 ZNF726A6NNF4 738 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 HNRNPCL2B2RXH8 293 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 HNRNPCL3B7ZW38 293 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 MS4A18H0YCH9 400 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 SDHDO14521 159 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 TMPRSS2O15393 492 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 HNRNPCL1O60812 293 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 NUDT7P0C024 238 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 HNRNPCL4P0DMR1 293 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 CCL2P13500 99 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 ANPEPP15144 967 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 AHCYP23526 432 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 HTR2AP28223 471 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 RAD52P43351 418 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 GLO1Q04760 184 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 LRRC74AQ0VAA2 488 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 FXNQ16595 210 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 MS4A18Q3C1V0 323 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 DCAF12L2Q5VW00 463 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 NXNQ6DKJ4 435 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 OGFOD2Q6N063 350 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 C1QL2Q7Z5L3 287 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 SNX33Q8WV41 574 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 MAL2Q969L2 176 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 VPS33AQ96AX1 596 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 RAB39BQ96DA2 213 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 DUX5Q96PT3 197 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 WDR55Q9H6Y2 383 aaPredicted RBP15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 KLHL14Q9P2G3 628 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 SLC7A8Q9UHI5 535 aa15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.2■□□□□ 0.02
PDLIM4-202ENST00000379018 IGKV1D-42A0A075B6H8 117 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 UBL3O95164 117 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 EPHA3P29320 983 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 ERVS71-1P61550 626 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 MRPS11P82912 194 aaKnown RBP15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 ZP4Q12836 540 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 PMS2P3Q13401 168 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 ALG10BQ5I7T1 473 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 C6orf10Q5SRN2 563 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 ZDHHC22Q8N966 263 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 FGFBP3Q8TAT2 258 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 NANPQ8TBE9 248 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 GTF3AQ92664 365 aaKnown RBP15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 PAIP2Q9BPZ3 127 aaKnown RBP15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 ASPNQ9BXN1 380 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 ZNF385DQ9H6B1 395 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 HINT3Q9NQE9 182 aaKnown RBP15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 PRDM4Q9UKN5 801 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 GPR45Q9Y5Y3 372 aa15.19■□□□□ 0.02
PDLIM4-202ENST00000379018 A0A087WUJ7 227 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 C17orf100A8MU93 164 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 C5orf58C9J3I9 102 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 LRRN3E7EW58 273 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 C11orf98E9PRG8 122 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 LCKP06239 509 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 CSNK1A1P48729 337 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 SELENOVP59797 346 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 NCALDP61601 193 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 UBA52P62987 128 aaKnown RBP15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 STX3Q13277 289 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 TSTQ16762 297 aaKnown RBP15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 C6orf89Q6UWU4 347 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 SNX32Q86XE0 403 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 PAQR4Q8N4S7 273 aaPredicted RBP15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 C1QTNF5Q9BXJ0 243 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 ROPN1BQ9BZX4 212 aaPredicted RBP15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 ROPN1Q9HAT0 212 aaPredicted RBP15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 CDH20Q9HBT6 801 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 DDX28Q9NUL7 540 aaKnown RBP15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 SELENONQ9NZV5 590 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 CACNG2Q9Y698 323 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 PKD1L1Q8TDX9 2849 aa15.18■□□□□ 0.02
PDLIM4-202ENST00000379018 ISPDA4D126 451 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 BIRC5O15392 142 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 PRSS23O95084 383 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 KITP10721 976 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms