RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
HIPK3-202ENST00000379016 MAGI3Q5TCQ9 1506 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 SSSCA1O60232 199 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 RPLP1P05386 114 aaKnown RBP12.34□□□□□ -0.43
HIPK3-202ENST00000379016 CD200P41217 278 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 UBE3DQ7Z6J8 389 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 INPP5KQ9BT40 448 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 CEPT1Q9Y6K0 416 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 PPP3CBP16298 524 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 PMCHP20382 165 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 IL4RP24394 825 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 OR10A3P58181 314 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 LRRC55Q6ZSA7 311 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 TMEM200AQ86VY9 491 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 OR10K1Q8NGX5 313 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 RPUSD4Q96CM3 377 aaKnown RBP12.34□□□□□ -0.43
HIPK3-202ENST00000379016 MED17Q9NVC6 651 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 USP3Q9Y6I4 520 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 ZCCHC11Q5TAX3 1644 aaKnown RBP12.34□□□□□ -0.43
HIPK3-202ENST00000379016 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
HIPK3-202ENST00000379016 HOXC5Q00444 222 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 GGHQ92820 318 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 SUSD3Q96L08 255 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 ZNF337Q9Y3M9 751 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 MYH1P12882 1939 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 MYH2Q9UKX2 1941 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 MYH4Q9Y623 1939 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 GPR12P47775 334 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 GIPRP48546 466 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 B3GNTL1Q67FW5 361 aaPredicted RBP12.34□□□□□ -0.43
HIPK3-202ENST00000379016 RELL2Q8NC24 303 aaPredicted RBP12.34□□□□□ -0.43
HIPK3-202ENST00000379016 OR5AR1Q8NGP9 310 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 ABHD4Q8TB40 342 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 IER2Q9BTL4 223 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 NTMT1Q9BV86 223 aa12.34□□□□□ -0.43
HIPK3-202ENST00000379016 TMEM123Q8N131 208 aa12.33□□□□□ -0.43
HIPK3-202ENST00000379016 GABRG1Q8N1C3 465 aa12.33□□□□□ -0.43
HIPK3-202ENST00000379016 OR5M8Q8NGP6 311 aa12.33□□□□□ -0.43
HIPK3-202ENST00000379016 FOXC2Q99958 501 aa12.33□□□□□ -0.43
HIPK3-202ENST00000379016 TMEM175Q9BSA9 504 aa12.33□□□□□ -0.43
HIPK3-202ENST00000379016 OCEL1Q9H607 264 aa12.33□□□□□ -0.43
HIPK3-202ENST00000379016 METTL17Q9H7H0 456 aaPredicted RBP12.33□□□□□ -0.43
HIPK3-202ENST00000379016 APOBEC3GQ9HC16 384 aaKnown RBP12.33□□□□□ -0.43
HIPK3-202ENST00000379016 HES4Q9HCC6 221 aa12.33□□□□□ -0.43
HIPK3-202ENST00000379016 CLTCL1P53675 1640 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 EIF3FO00303 357 aaPredicted RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 DEDDO75618 318 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 AHRP35869 848 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 NUDT10Q8NFP7 164 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 NUDT11Q96G61 164 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 DRGXA6NNA5 263 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 ARHGAP33O14559 1287 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 FABP4P15090 132 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 TAS2R45P59539 299 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF239Q16600 458 aaKnown RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 RNFT1Q5M7Z0 435 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 RANBP10Q6VN20 620 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 RFPL4BQ6ZWI9 263 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 OR8J3Q8NGG0 315 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 SLC35A3Q9Y2D2 325 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 LRRIQ1Q96JM4 1722 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 COCHO43405 550 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 SIX6O95475 246 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 SOX18P35713 384 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 MAP2K6P52564 334 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 CPZQ66K79 652 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 PPP1R3BQ86XI6 285 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 CDH26Q8IXH8 852 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 ZFP62Q8NB50 900 aaPredicted RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 PIGTQ969N2 578 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 TAS2R5Q9NYW4 299 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 I6L893 689 aaPredicted RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 KLRC4O43908 158 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 NEURL1O76050 574 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 CLDN12P56749 244 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 CTRCQ99895 268 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 DUSP23Q9BVJ7 150 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 PLEKHF2Q9H8W4 249 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 SPAG17Q6Q759 2223 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 OSMP13725 252 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 CA5AP35218 305 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 OR1D4P47884 311 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 PMP22Q01453 160 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 SYT6Q5T7P8 510 aaPredicted RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 LYPD4Q6UWN0 246 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 ZFAND4Q86XD8 727 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 B3GNT7Q8NFL0 401 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 NDRG3Q9UGV2 375 aa12.33□□□□□ -0.44
HIPK3-202ENST00000379016 MRPS28Q9Y2Q9 187 aaKnown RBP12.33□□□□□ -0.44
HIPK3-202ENST00000379016 H7C1C5 153 aa12.32□□□□□ -0.44
HIPK3-202ENST00000379016 ZNF195O14628 629 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms