RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 HMGN2P46Q86SG4 172 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 PARGQ86W56 976 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 GABRG1Q8N1C3 465 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 C15orf54Q8N8G6 183 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 LINC01555Q8NAE3 123 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 NPEPL1Q8NDH3 523 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 LIPHQ8WWY8 451 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 HSPA12BQ96MM6 686 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 TNFRSF13CQ96RJ3 184 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 PRRT1Q99946 306 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 PDCD1LG2Q9BQ51 273 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 TRMT61BQ9BVS5 477 aaKnown RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 HDAC8Q9BY41 377 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 TMEM185BQ9H7F4 350 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 LYRM4Q9HD34 91 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 ERVK-19Q9WJR5 959 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 ZNF337Q9Y3M9 751 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 A0A1W2PPK0 400 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 C1QTNF3-AMACRE9PGA6 284 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 RFXAPO00287 272 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 SLC17A2O00624 439 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 SCGNO76038 276 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 NTN1O95631 604 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 PRKAR2AP13861 404 aaKnown RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 CD34P28906 385 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 DLSTP36957 453 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 FLT3LGP49771 235 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 POLR2GP62487 172 aaKnown RBP eCLIP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 INPP5JQ15735 1006 aaPredicted RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 C2orf68Q2NKX9 166 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 TMEM215Q68D42 235 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 FAM109BQ6ICB4 259 aaPredicted RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 EIF5AL1Q6IS14 154 aaKnown RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 MTFR2Q6P444 385 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 SYT9Q86SS6 491 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 SERPINA12Q8IW75 414 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 ZNF440Q8IYI8 595 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 LMNTD1Q8N9Z9 388 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 OR51S1Q8NGJ8 323 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 RGP1Q92546 391 aaPredicted RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 FERD3LQ96RJ6 166 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 ZNF471Q9BX82 626 aaPredicted RBP7.49□□□□□ -1.21
PTPRR-203ENST00000378778 POFUT1Q9H488 388 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 MKL2Q9ULH7 1088 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 PCDHB10Q9UN67 800 aa7.49□□□□□ -1.21
PTPRR-203ENST00000378778 TRAV27A0A087WT01 109 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 TEX13DA0A0J9YY54 714 aaPredicted RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 A0A1B0GWA3 101 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 MEGF11A6BM72 1044 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 METTL21EPA6NDL7 271 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 GLOD5A6NK44 160 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 EFCAB7A8K855 629 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 DOK2O60496 412 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 FGF18O76093 207 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 TXNDC12O95881 172 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CLUP10909 449 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 ADRB3P13945 408 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 HIST1H1CP16403 213 aaKnown RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 S100PP25815 95 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CERS1P27544 350 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 PSMB5P28074 263 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 TACR3P29371 465 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 PPM1AP35813 382 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 LUMP51884 338 aaPredicted RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 TAS2R31P59538 309 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 UBE2IP63279 158 aaKnown RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 GRM7Q14831 915 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 RAB11BQ15907 218 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 FAM111BQ6SJ93 734 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 TMPRSS12Q86WS5 348 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 GTPBP8Q8N3Z3 284 aaPredicted RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 COX18Q8N8Q8 333 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CYB561A3Q8NBI2 242 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 SDR9C7Q8NEX9 313 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 OR51A7Q8NH64 312 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 TCEAL3Q969E4 200 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 MCHR2Q969V1 340 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 SLC25A18Q9H1K4 315 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 ESRP2Q9H6T0 727 aaKnown RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 C2orf42Q9NWW7 574 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 SPHK1Q9NYA1 384 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CPNE7Q9UBL6 633 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 SPACA6W5XKT8 324 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 TBC1D3IA0A087WXS9 549 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 A0A1W2PQ45 241 aaPredicted RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 A0A1W2PQY0 241 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 K7ESM1 405 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 UPK3AO75631 287 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 RAB3DO95716 219 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 C8orf89P0DMQ9 161 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CPMP14384 443 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CASRP41180 1078 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 SLC6A9P48067 706 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CX3CR1P49238 355 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 RPS4XP62701 263 aaKnown RBP7.48□□□□□ -1.21
PTPRR-203ENST00000378778 BLOC1S1P78537 153 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 CCINQ13939 588 aa7.48□□□□□ -1.21
PTPRR-203ENST00000378778 RPE65Q16518 533 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms