RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CPLX4Q7Z7G2 160 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 FAM169BQ8N8A8 192 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 TMEM255BQ8WV15 326 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 TMEM239Q8WW34 195 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 TXNDC15Q96J42 360 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 PRRC1Q96M27 445 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 MYLK2Q9H1R3 596 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 GSX1Q9H4S2 264 aaPredicted RBP14.67□□□□□ -0.06
HMGN4-201ENST00000377575 MOKQ9UQ07 419 aa14.67□□□□□ -0.06
HMGN4-201ENST00000377575 ALPK2Q86TB3 2170 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 CXCR6O00574 342 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 SNX3O60493 162 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 IGKV3-15P01624 115 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 BMP4P12644 408 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 PRDX6P30041 224 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 CAPZA2P47755 286 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 UGT2B15P54855 530 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 TUBA1BP68363 451 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 TUBA4AP68366 448 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 ST3GAL3Q11203 375 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 CLEC12BQ2HXU8 276 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 PHYHD1Q5SRE7 291 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 C11orf71Q6IPW1 123 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 C8orf82Q6P1X6 216 aaPredicted RBP14.66□□□□□ -0.06
HMGN4-201ENST00000377575 CLEC9AQ6UXN8 241 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 NHLRC1Q6VVB1 395 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 TUBA1AQ71U36 451 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 SLC46A3Q7Z3Q1 461 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 NKAIN4Q8IVV8 208 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 LRRC17Q8N6Y2 441 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 OR6X1Q8NH79 312 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 PFN4Q8NHR9 129 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 GEMIN6Q8WXD5 167 aaKnown RBP14.66□□□□□ -0.06
HMGN4-201ENST00000377575 NANOS1Q8WY41 292 aaKnown RBP14.66□□□□□ -0.06
HMGN4-201ENST00000377575 ZNF837Q96EG3 531 aaPredicted RBP14.66□□□□□ -0.06
HMGN4-201ENST00000377575 SGTBQ96EQ0 304 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 CACNG6Q9BXT2 260 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 MEPEQ9NQ76 525 aaPredicted RBP14.66□□□□□ -0.06
HMGN4-201ENST00000377575 TAS2R5Q9NYW4 299 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 POFUT2Q9Y2G5 429 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 MED31Q9Y3C7 131 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 NF1P21359 2839 aa14.66□□□□□ -0.06
HMGN4-201ENST00000377575 BLOC1S5-TXNDC5H3BN57 136 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 SMAD7O15105 426 aaKnown RBP14.65□□□□□ -0.06
HMGN4-201ENST00000377575 SEC14L2O76054 403 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 OR7A10O76100 309 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 ZNF682O95780 498 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 IGLV1-44P01699 117 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 IGHV4-39P01824 125 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 IFNW1P05000 195 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 CECR9P0C854 216 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 DRD4P21917 467 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 APOBEC3AP31941 199 aaPredicted RBP14.65□□□□□ -0.06
HMGN4-201ENST00000377575 ARR3P36575 388 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 GSK3BP49841 420 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 HDDC2Q7Z4H3 204 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 ZNF566Q969W8 418 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 KCTD14Q9BQ13 255 aaPredicted RBP14.65□□□□□ -0.06
HMGN4-201ENST00000377575 ABCD2Q9UBJ2 740 aa14.65□□□□□ -0.06
HMGN4-201ENST00000377575 A0A1W2PRG6 482 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 GMNCA6NCL1 334 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 MCIDASD6RGH6 385 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 ENTPD5O75356 428 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 HEXAP06865 529 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 CBR1P16152 277 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 NAAAQ02083 359 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 CHRNB3Q05901 458 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 RPL18Q07020 188 aaKnown RBP14.64□□□□□ -0.07
HMGN4-201ENST00000377575 MELKQ14680 651 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 IFI44LQ53G44 452 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 ZNF813Q6ZN06 617 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 CBLL1Q75N03 491 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 ZNF627Q7L945 461 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 VTCN1Q7Z7D3 282 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 OFCC1Q8IZS5 231 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 CIARTQ8N365 385 aaPredicted RBP14.64□□□□□ -0.07
HMGN4-201ENST00000377575 OR4F15Q8NGB8 312 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 FAM162AQ96A26 154 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 SLC25A44Q96H78 314 aaPredicted RBP14.64□□□□□ -0.07
HMGN4-201ENST00000377575 FOXB1Q99853 325 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 SMR3AQ99954 134 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 SPAG4Q9NPE6 437 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 GMPR2Q9P2T1 348 aaKnown RBP14.64□□□□□ -0.07
HMGN4-201ENST00000377575 A4GNTQ9UNA3 340 aa14.64□□□□□ -0.07
HMGN4-201ENST00000377575 HTR3EA5X5Y0 456 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 H7C417 338 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 BCL10O95999 233 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 SERPINA1P01009 418 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 IGHG1P01857 330 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 B4GALT1P15291 398 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 FUT1P19526 365 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 ACVR1BP36896 505 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 DAP3P51398 398 aaKnown RBP14.63□□□□□ -0.07
HMGN4-201ENST00000377575 IDH3GP51553 393 aaPredicted RBP14.63□□□□□ -0.07
HMGN4-201ENST00000377575 NUDT6P53370 316 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 PSME3P61289 254 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 GNGT1P63211 74 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 NPRL3Q12980 569 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 MDP1Q86V88 176 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 WDFY1Q8IWB7 410 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms