RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 SLC22A20A6NK97 555 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 PRR23D1E9PI22 279 aaPredicted RBP13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 CYTIPO60759 359 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 TXNDC12O95881 172 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 TGM6O95932 706 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 IGHMP01871 453 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 PRR23D2P0DMB1 279 aaPredicted RBP13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 TDGF1P3P51864 188 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 EFNB1P98172 346 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 EMC4Q5J8M3 183 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 C6orf141Q5SZD1 244 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 ARMC4Q5T2S8 1044 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 LAIR2Q6ISS4 152 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 UGT2A3Q6UWM9 527 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 GFRALQ6UXV0 394 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 MCEMP1Q8IX19 187 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 SYT14Q8NB59 555 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 ZNF519Q8TB69 540 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 FBLIM1Q8WUP2 373 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 ZNF385AQ96PM9 386 aaKnown RBP13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 RERGLQ9H628 205 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 AMBNQ9NP70 447 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 FANCFQ9NPI8 374 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 NBEAQ8NFP9 2946 aa13.16□□□□□ -0.3
CHRDL2-202ENST00000376324 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 ZNF726A6NNF4 738 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 ZNF716A6NP11 495 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 XPNPEP2O43895 674 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 GYPBP06028 91 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 CLUP10909 449 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 ABOP16442 354 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 PAICSP22234 425 aaKnown RBP13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 NFATC3Q12968 1075 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 CAMK2DQ13557 499 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 KLHL12Q53G59 568 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 NHLRC1Q6VVB1 395 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 FAM26EQ8N5C1 309 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 NPEPL1Q8NDH3 523 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 HDAC2Q92769 488 aaKnown RBP13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 ZNF582Q96NG8 517 aaPredicted RBP13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 SLX1AQ9BQ83 275 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 SF3B5Q9BWJ5 86 aaKnown RBP13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 OR51V1Q9H2C8 321 aa13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 RPRD1BQ9NQG5 326 aaKnown RBP13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 H2AFY2Q9P0M6 372 aaPredicted RBP13.15□□□□□ -0.3
CHRDL2-202ENST00000376324 LOC102725191A0A1B0GVB3 256 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 A6NIZ1 184 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 EIF4E1BA6NMX2 242 aaKnown RBP13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 FAM20BO75063 409 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 TRMUO75648 421 aaKnown RBP13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 RENP00797 406 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 CHN2P52757 468 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 SLC16A1P53985 500 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 RAP1BP61224 184 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 RPS7P62081 194 aaKnown RBP13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 RAP1AP62834 184 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 POU4F3Q15319 338 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 CD163Q86VB7 1156 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 OR51L1Q8NGJ5 315 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 RNF128Q8TEB7 428 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 PTP4A1Q93096 173 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 TSSK2Q96PF2 358 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 SYT4Q9H2B2 425 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 CALHM2Q9HA72 323 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 SRA1Q9HD15 236 aaKnown RBP13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 FLVCR1Q9Y5Y0 555 aa13.15□□□□□ -0.31
CHRDL2-202ENST00000376324 MED12LQ86YW9 2145 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 FAM171A2A8MVW0 826 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 OCLNQ16625 522 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 NIPAL3Q6P499 406 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 RPTNQ6XPR3 784 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 B3GLCTQ6Y288 498 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 ZIC4Q8N9L1 334 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 Q96MT0 163 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 KLHL9Q9P2J3 617 aa13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 ING1Q9UK53 422 aaPredicted RBP13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 RP1L1Q8IWN7 2480 aaPredicted RBP13.14□□□□□ -0.31
CHRDL2-202ENST00000376324 PRSS37A4D1T9 235 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 NPIPB13A6NJU9 1138 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 AHRRA9YTQ3 701 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 NPIPB4C9JG80 1138 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 SLC1A7O00341 560 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 PYCR1P32322 319 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 SELENOPP49908 381 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 CDH11P55287 796 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 CLRN1P58418 232 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 APOFQ13790 326 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 ACSF3Q4G176 576 aaPredicted RBP13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 TMEM201Q5SNT2 666 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 AADACL4Q5VUY2 407 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 MEDAGQ5VYS4 303 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 C3P1Q6ZMU1 363 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 ADCK1Q86TW2 530 aa13.13□□□□□ -0.31
CHRDL2-202ENST00000376324 OR6X1Q8NH79 312 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms