RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 LALBAP00709 142 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 APOC3P02656 99 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ANKRD34CP0C6C1 535 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 PRKAR1AP10644 381 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 RAB3BP20337 219 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 CD79BP40259 229 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 DHPSP49366 369 aaPredicted RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 PNLIPRP2P54317 469 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ACTA2P62736 377 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 PPP3R1P63098 170 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ACTG2P63267 376 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 IL10RAQ13651 578 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 EBPQ15125 230 aaKnown RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 PON3Q15166 354 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.48□□□□□ -1.212e-8■■■□□ 15.8
UBR4-202ENST00000375224 NDUFAF6Q330K2 333 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 SLC16A13Q7RTY0 426 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 TMEM99Q8N816 258 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ZFP41Q8N8Y5 198 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 OR5W2Q8NH69 310 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ZNF563Q8TA94 476 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 NEIL3Q8TAT5 605 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 KIAA1143Q96AT1 154 aaPredicted RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 KLHL15Q96M94 604 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 NUDT9Q9BW91 350 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 HCAR1Q9BXC0 346 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 TGIF2Q9GZN2 237 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ADGRL4Q9HBW9 690 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 PLEKHB1Q9UF11 243 aaPredicted RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 YARS2Q9Y2Z4 477 aaKnown RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 XIRP2A4UGR9 3374 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 LOC390937A0A1W2PQ73 354 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 SIGLEC6O43699 453 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 TRIM3O75382 744 aaPredicted RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 S100A8P05109 93 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 OR2T7P0C7T2 308 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 EPHA8P29322 1005 aaPredicted RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 RIDAP52758 137 aaKnown RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 GGTLC2Q14390 218 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 RHBDD2Q6NTF9 364 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 TFAP2EQ6VUC0 442 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ZNF321PQ8N8H1 164 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 OR2T27Q8NH04 317 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ASB15Q8WXK1 588 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 LINC00052Q96N35 136 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ADOQ96SZ5 270 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 CNN2Q99439 309 aaKnown RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 NRIP3Q9NQ35 241 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 SPTBN5Q9NRC6 3674 aaKnown RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 UNC13CQ8NB66 2214 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 AGRPO00253 132 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 PLPP2O43688 288 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 SERPINA3P01011 423 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 HIST1H1CP16403 213 aaKnown RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 PTBP1P26599 531 aaKnown RBP eCLIP7.48□□□□□ -1.215e-9■■■■□ 19.4
UBR4-202ENST00000375224 MTNR1BP49286 362 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 P2RY4P51582 365 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 RPS4XP62701 263 aaKnown RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 PLCXD2Q0VAA5 305 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 SHBQ15464 509 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 CD226Q15762 336 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 AKIRIN2Q53H80 203 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 VWA2Q5GFL6 755 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 METAP1DQ6UB28 335 aaPredicted RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 PAMR1Q6UXH9 720 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 RAB11FIP2Q7L804 512 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 MS4A15Q8N5U1 240 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 C10orf53Q8N6V4 93 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 GATSQ8NAP1 163 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 CYB561A3Q8NBI2 242 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 OR4K13Q8NH42 304 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 CA5BP1Q8WTZ4 195 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ACOT12Q8WYK0 555 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 ARSGQ96EG1 525 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 TBX5Q99593 518 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 VN1R1Q9GZP7 353 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 WWTR1Q9GZV5 400 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 MS4A7Q9GZW8 240 aaPredicted RBP7.48□□□□□ -1.21
UBR4-202ENST00000375224 SHARPINQ9H0F6 387 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 OR51M1Q9H341 326 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 RNF121Q9H920 327 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 NANSQ9NR45 359 aa7.48□□□□□ -1.21
UBR4-202ENST00000375224 A0A1W2PQL4 384 aaPredicted RBP7.47□□□□□ -1.21
UBR4-202ENST00000375224 hCG_1807616A0A1W2PRN6 198 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 ZC3H12DA2A288 527 aaKnown RBP7.47□□□□□ -1.21
UBR4-202ENST00000375224 ALG1L2C9J202 215 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 MCIDASD6RGH6 385 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 TSPAN2O60636 221 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 HIST1H2ABP04908 130 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 ATXN8OSP0DMR3 200 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 PGCP20142 388 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 NR0B1P51843 470 aaKnown RBP7.47□□□□□ -1.21
UBR4-202ENST00000375224 CASP6P55212 293 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 DEFA5Q01523 94 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 HSF2Q03933 536 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 COL28A1Q2UY09 1125 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 C1orf189Q5VU69 101 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 B3GLCTQ6Y288 498 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 HIST3H2AQ7L7L0 130 aa7.47□□□□□ -1.21
UBR4-202ENST00000375224 SYS1Q8N2H4 156 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms