RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 LYSMD2Q8IV50 215 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 LAX1Q8IWV1 398 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CT55Q8WUE5 264 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ARL5BQ96KC2 179 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CDC6Q99741 560 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SRA1Q9HD15 236 aaKnown RBP16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SH2D2AQ9NP31 389 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ALKBH4Q9NXW9 302 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PISDQ9UG56 409 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DAPK2Q9UIK4 370 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 GNG8Q9UK08 70 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 GRIP1Q9Y3R0 1128 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ALPK2Q86TB3 2170 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 hCG_2014768A0A024R1R8 64 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 A0A1W2PRG6 482 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 LIPT2A6NK58 231 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 FAM47E-STBD1D6RA91 191 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 RGS5O15539 181 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 IMPDH2P12268 514 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ADH6P28332 368 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 GTF2E2P29084 291 aaKnown RBP16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 GDI2P50395 445 aaKnown RBP16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 BLVRAP53004 296 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 MLF1P58340 268 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 MRPL28Q13084 256 aaKnown RBP16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TRIM16LQ309B1 348 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 DDI2Q5TDH0 399 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PAMR1Q6UXH9 720 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PLEKHG7Q6ZR37 379 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TIPARPQ7Z3E1 657 aaKnown RBP16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PM20D2Q8IYS1 436 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 WDSUB1Q8N9V3 476 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 GHSRQ92847 366 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 NXPE2Q96DL1 559 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TTTY10Q9BZA0 68 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 MIXL1Q9H2W2 232 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ZNF160Q9HCG1 818 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 CHST11Q9NPF2 352 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 SERINC1Q9NRX5 453 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ACOXLQ9NUZ1 547 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 V9GYH0 126 aa16.21■□□□□ 0.18
HLA-DQB1-201ENST00000374943 A6NIZ1 184 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 MS4A18H0YCH9 400 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 DVL2O14641 736 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PHYHO14832 338 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 MAGEB3O15480 346 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 EFNA2O43921 213 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 GPRIN2O60269 458 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PLGP00747 810 aaPredicted RBP16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 JMJD7P0C870 316 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 IL11P20809 199 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TGM1P22735 817 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 EIF1P41567 113 aaKnown RBP16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 RAP1BP61224 184 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 RAP1AP62834 184 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 CHAF1BQ13112 559 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 OR7A5Q15622 319 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 MS4A18Q3C1V0 323 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 FAM205BPQ63HN1 556 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 C3orf33Q6P1S2 294 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TPRA1Q86W33 373 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 RPS19BP1Q86WX3 136 aaKnown RBP16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ZNF248Q8NDW4 579 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ADPRHL1Q8NDY3 354 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 OR4K17Q8NGC6 315 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 KLHL15Q96M94 604 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 INTS14Q96SY0 518 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 EDEM2Q9BV94 578 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ANGPTL4Q9BY76 406 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 RNF32Q9H0A6 362 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PTGES2Q9H7Z7 377 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 WDR76Q9H967 626 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ABCB9Q9NP78 766 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TMEM9BQ9NQ34 198 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 FBXL2Q9UKC9 423 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 B9D1Q9UPM9 204 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TMEM14AQ9Y6G1 99 aa16.2■□□□□ 0.18
HLA-DQB1-201ENST00000374943 KIAA1549Q9HCM3 1950 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 A0A087WZY1 265 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 A0A1W2PNV4 684 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PMS2P1A4D2B8 440 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 HSPB2A8KAH6 182 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PRR32B1ATL7 298 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 MAGEB4O15481 346 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TBX1O43435 398 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 GFRA3O60609 400 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 HPP00738 406 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ICAM2P13598 275 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 FKBP2P26885 142 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PPP3R1P63098 170 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 EIF3IQ13347 325 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 SSPNQ14714 243 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 HSPB2Q16082 182 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 IL20RBQ6UXL0 311 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 TRILQ7L0X0 811 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 CEACAM19Q7Z692 300 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 PAQR8Q8TEZ7 354 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 SLC25A43Q8WUT9 341 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 ZBTB8AQ96BR9 441 aa16.19■□□□□ 0.18
HLA-DQB1-201ENST00000374943 SDHCQ99643 169 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms