RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 LANCL2Q9NS86 450 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 KLHL9Q9P2J3 617 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 CLEC4AQ9UMR7 237 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 MRPS7Q9Y2R9 242 aaKnown RBP12.67□□□□□ -0.38
HMGCL-203ENST00000374490 TMEM131Q92545 1883 aa12.67□□□□□ -0.38
HMGCL-203ENST00000374490 TRAV6A0A075B6T7 132 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 TRBV5-5A0A0J9YX44 114 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 A0A1W2PPK0 400 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 A0A1W2PQD3 144 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 A6NL46 340 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 EIF4E2O60573 245 aaKnown RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 KRT33AO76009 404 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 LDOC1O95751 146 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 RAF1P04049 648 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 DPP4P27487 766 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 GDNFP39905 211 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 CENPAP49450 140 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 CCR9P51686 369 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 NXPH1P58417 271 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 GALK2Q01415 458 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 TIGD4Q8IY51 512 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 GATSQ8NAP1 163 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 OR5AK2Q8NH90 309 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF563Q8TA94 476 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 PTPMT1Q8WUK0 201 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 HSD17B8Q92506 261 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 NSMAFQ92636 917 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 S100A16Q96FQ6 103 aaKnown RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 ADAM19Q9H013 955 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 COMMD4Q9H0A8 199 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 DUSP15Q9H1R2 295 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 CUTCQ9NTM9 273 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 HSPB11Q9Y547 144 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 TP53BP1Q12888 1972 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 A0A0B4J203 849 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 A0A1B0GVT2 93 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 BCAT2O15382 392 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 ZFPL1O95159 310 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 PPM1FP49593 454 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 AFF3P51826 1226 aaKnown RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 BLVRAP53004 296 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 GSG1Q2KHT4 349 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 LAMTOR1Q6IAA8 161 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 FAM199XQ6PEV8 388 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 LINGO2Q7L985 606 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 C9orf62Q8N4C0 152 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 DNASE2BQ8WZ79 361 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 HGDQ93099 445 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 LOXL4Q96JB6 756 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 TGM7Q96PF1 710 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 LPAR4Q99677 370 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 SPRTNQ9H040 489 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 NXF5Q9H1B4 397 aaKnown RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 WDR76Q9H967 626 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 PNO1Q9NRX1 252 aaKnown RBP12.66□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF222Q9UK12 451 aa12.66□□□□□ -0.38
HMGCL-203ENST00000374490 TRAV36DV7A0A075B6V5 113 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 IGKV3D-11A0A0A0MRZ8 115 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 CCDC163A0A0D9SF12 145 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 ACOD1A6NK06 481 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 TMEM212A6NML5 194 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 TO15178 435 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 FABP7O15540 132 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 OIP5O43482 229 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 GDF9O60383 454 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 CDC40O60508 579 aaKnown RBP eCLIP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 UPK3AO75631 287 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 SERPINI2O75830 405 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 ABHD16AO95870 558 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 MT-ATP6P00846 226 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 OR8G3PP0DMU2 310 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 PRKCAP17252 672 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 TACR3P29371 465 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 CSNK1EP49674 416 aaKnown RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 RASGEF1BQ0VAM2 473 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 ELAVL1Q15717 326 aaKnown RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 GXYLT1Q4G148 440 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 RNASE12Q5GAN4 147 aaKnown RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 HES5Q5TA89 166 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 EEF1A1P5Q5VTE0 462 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 HLA-DQA1Q5Y7H0 255 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 OLFML2AQ68BL7 652 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 OGFOD3Q6PK18 319 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 SYT9Q86SS6 491 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 LSRQ86X29 649 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 METTL27Q8N6F8 245 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF431Q8TF32 576 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 FCAMRQ8WWV6 532 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 TTC9Q92623 222 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 HAVCR1Q96D42 359 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 SLC25A38Q96DW6 304 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 MAP6Q96JE9 813 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 GPR137Q96N19 417 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 MOGAT1Q96PD6 335 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 GFI1Q99684 422 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms