RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 FOLR1P15328 257 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 APEX1P27695 318 aaKnown RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 EMP2P54851 167 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SLC10A1Q14973 349 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 PCK2Q16822 640 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SLC48A1Q6P1K1 146 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 FRMD1Q8N878 549 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 PRSS16Q9NQE7 514 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 ETV7Q9Y603 341 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SERINC4A6NH21 518 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF593O00488 134 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 ABLIM3O94929 683 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 TXNDC12O95881 172 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 IGHG1P01857 330 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 PSMB3P49720 205 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 UBE2NP61088 152 aaKnown RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 ERV3-1Q14264 604 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 NR0B2Q15466 257 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 FAM78AQ5JUQ0 283 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 OR7E24Q6IFN5 339 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 CHRDQ9H2X0 955 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 PDFQ9HBH1 243 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 LRIT2A6NDA9 550 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SUSD5O60279 629 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 TOX4O94842 621 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 CLEC2LP0C7M8 214 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SLC35A2P78381 396 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 STK11Q15831 433 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 LIX1LQ8IVB5 337 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 RIMKLAQ8IXN7 391 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 KCNRGQ8N5I3 272 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 SLC22A12Q96S37 553 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 NDRG4Q9ULP0 352 aaKnown RBP13.14□□□□□ -0.31
LMX1B-202ENST00000373474 GAB2Q9UQC2 676 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
LMX1B-202ENST00000373474 COL18A1P39060 1754 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 IGLV3-25P01717 112 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 RPS18P62269 152 aaKnown RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 RAB1AP62820 205 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 EXOSC6Q5RKV6 272 aaKnown RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 CD300LGQ6UXG3 332 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 FBXW12Q6X9E4 464 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 SSX7Q7RTT5 188 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 C19orf47Q8N9M1 422 aaKnown RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 TUBAL3A6NHL2 446 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 TMEM200CA6NKL6 621 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 KDM4EB2RXH2 506 aaPredicted RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 TK1P04183 234 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 TRHRP34981 398 aaPredicted RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 GPLD1P80108 840 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 GAB1Q13480 694 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 Q499Y3 187 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 CCSMST1Q4G0I0 132 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 DBX2Q6ZNG2 339 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 SLC25A46Q96AG3 418 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 WDR76Q9H967 626 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 TRBV11-1A0A0K0K1C0 115 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF28P17035 718 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 BCL6P41182 706 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 ATPAF1Q5TC12 328 aaPredicted RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 B3GLCTQ6Y288 498 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 SIAH3Q8IW03 269 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF740Q8NDX6 193 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 EXOSC3Q9NQT5 275 aaKnown RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 CHRNA9Q9UGM1 479 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 LOC102725191A0A1B0GVB3 256 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 CBR1P16152 277 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 FOLR3P41439 243 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 HNF4GQ14541 408 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 HEPHL1Q6MZM0 1159 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 OR14A16Q8NHC5 309 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 WFDC5Q8TCV5 224 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 NUDT8Q8WV74 236 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 UBE2FQ969M7 185 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF566Q969W8 418 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 SPHK1Q9NYA1 384 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 A8MVM7 634 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 GJA4P35212 333 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 RPS19P39019 145 aaKnown RBP13.13□□□□□ -0.31
LMX1B-202ENST00000373474 OR52W1Q6IF63 320 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 OR56B1Q8NGI3 324 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 SLC25A32Q9H2D1 315 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 CDH20Q9HBT6 801 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 PLEK2Q9NYT0 353 aa13.13□□□□□ -0.31
LMX1B-202ENST00000373474 SERPINA2P20848 420 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 APLNRP35414 380 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 CSNK1G2P78368 415 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 TEKQ02763 1124 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms