RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ZNF587BE7ETH6 402 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 TCF21O43680 179 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 SNX3O60493 162 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 BGLAPP02818 100 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 DRD4P21917 467 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 MPGP29372 298 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 SELENOPP49908 381 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 CLDN17P56750 224 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 CARTPTQ16568 116 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 SWI5Q1ZZU3 235 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 C1QTNF12Q5T7M4 302 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 TTC33Q6PID6 262 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 KDM8Q8N371 416 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 SCAIQ8N9R8 606 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 ZNF540Q8NDQ6 660 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 MPP4Q96JB8 637 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 HOPXQ9BPY8 73 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 MYOZ1Q9NP98 299 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 CMTM6Q9NX76 183 aa16.7■□□□□ 0.26
TRAPPC3-204ENST00000373166 PLCE1Q9P212 2302 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 NDUFAB1O14561 156 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 MT-ATP6P00846 226 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 KDELR2P33947 212 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC7A2P52569 658 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 GYS2P54840 703 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 FOXG1P55316 489 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 SNRPD2P62316 118 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 LIPEQ05469 1076 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 PMS2P3Q13401 168 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 MST1LQ2TV78 715 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 CR1LQ2VPA4 569 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 CYBRD1Q53TN4 286 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 KLHL24Q6TFL4 600 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 HACD2Q6Y1H2 254 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 DEF8Q6ZN54 512 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 UEVLDQ8IX04 471 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC41A3Q96GZ6 507 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 MOGAT1Q96PD6 335 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 SORCS2Q96PQ0 1159 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 ALKBH3Q96Q83 286 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 POLR2J2Q9GZM3 115 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 POLR2J3Q9H1A7 115 aaKnown RBP16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 MYLK2Q9H1R3 596 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC17A5Q9NRA2 495 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 B3GAT1Q9P2W7 334 aa16.69■□□□□ 0.26
TRAPPC3-204ENST00000373166 YLPM1P49750 1951 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 ATP6V1G2-DDX39BF2Z307 99 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 GSTA4O15217 222 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC43A1O75387 559 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 ZNF23P17027 643 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 CDH2P19022 906 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 TNFRSF1BP20333 461 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 PRDX6P30041 224 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 TAS2R41P59536 307 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 PRPS1P60891 318 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 LINC00114Q6XXX2 140 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 WDR88Q6ZMY6 472 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC15A3Q8IY34 581 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 LZICQ8WZA0 190 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 TPD52L3Q96J77 140 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 VRK1Q99986 396 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC19A3Q9BZV2 496 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 MRPL39Q9NYK5 338 aaKnown RBP16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 MOKQ9UQ07 419 aa16.68■□□□□ 0.26
TRAPPC3-204ENST00000373166 LOC102725191A0A1B0GVB3 256 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 KPNA4O00629 521 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 NME4O00746 187 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 LYPD3O95274 346 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 WNT11O96014 354 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 THY1P04216 161 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 LGALS3BPQ08380 585 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 PUDPQ08623 228 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 C8orf82Q6P1X6 216 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC46A3Q7Z3Q1 461 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 TSPYL5Q86VY4 417 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 LINC00470Q9BZP3 86 aa16.67■□□□□ 0.26
TRAPPC3-204ENST00000373166 LRRN3E7EW58 273 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 DYNC1I1O14576 645 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 TRAF3IP2O43734 574 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 OR5F1O95221 314 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 OR6A2O95222 327 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 SERPINF1P36955 418 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 SLC25A3Q00325 362 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 POU3F1Q03052 451 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 C12orf54Q6X4T0 127 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 MEX3DQ86XN8 651 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 GPR137CQ8N3F9 429 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 PIK3C3Q8NEB9 887 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 OR5J2Q8NH18 312 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 ZNF426Q9BUY5 554 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 NOX1Q9Y5S8 564 aa16.66■□□□□ 0.26
TRAPPC3-204ENST00000373166 MS4A18H0YCH9 400 aa16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 CXCR6O00574 342 aa16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 SHOX2O60902 331 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 UPK3AO75631 287 aa16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 ZNF432O94892 652 aa16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 CH25HO95992 272 aa16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 HPRP00739 348 aa16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 AHCYP23526 432 aa16.65■□□□□ 0.26
TRAPPC3-204ENST00000373166 SRP14P37108 136 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms