RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TMEM52Q8NDY8 209 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 OR4C6Q8NH72 309 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 RXFP4Q8TDU9 374 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 NKD1Q969G9 470 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MS4A6EQ96DS6 147 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SMIM19Q96E16 107 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 HSPA12BQ96MM6 686 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 LRRC3BQ96PB8 259 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MENTQ9BUN1 341 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CPEB1Q9BZB8 566 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 EXO5Q9H790 373 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MRPS30Q9NP92 439 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PRDM7Q9NQW5 492 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CMC2Q9NRP2 79 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 STARD5Q9NSY2 213 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ACSS1Q9NUB1 689 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 RNF186Q9NXI6 227 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SAGE1Q9NXZ1 904 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 AHSPQ9NZD4 102 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CTSFQ9UBX1 484 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 STEAP1Q9UHE8 339 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 DTX4Q9Y2E6 619 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MRPS2Q9Y399 296 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MTCL1Q9Y4B5 1905 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM72A0PK05 275 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 IRGMA1A4Y4 181 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 OTOL1A6NHN0 477 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 RIIAD1A6NNX1 92 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 GABARAPH6UMI1 98 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 TGM5O43548 720 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SGCEO43556 437 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 WISP1O95388 367 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PAPLNO95428 1278 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ASGR2P07307 311 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PCSK2P16519 638 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF16P17020 682 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PVALBP20472 110 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 HIST1H1TP22492 207 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MAOBP27338 520 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CSF2RBP32927 897 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 AQP2P41181 271 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 EMDP50402 254 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 RAB13P51153 203 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SHC2P98077 582 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 FHL1Q13642 323 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 DEFB134Q4QY38 66 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PAN3Q58A45 887 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CDPF1Q6NVV7 123 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 STAC2Q6ZMT1 411 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 DGAT2L6Q6ZPD8 337 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 HTR3DQ70Z44 454 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 RNF44Q7L0R7 432 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 HSD17B13Q7Z5P4 300 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 TPRA1Q86W33 373 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SFTPA2Q8IWL1 248 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PM20D2Q8IYS1 436 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 LNX2Q8N448 690 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 OR5T3Q8NGG3 340 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 OR2A1Q8NGT9 310 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 OR10R2Q8NGX6 335 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 OR14A16Q8NHC5 309 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CASTOR1Q8WTX7 329 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ISOC2Q96AB3 205 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 TRIM43Q96BQ3 446 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CMBLQ96DG6 245 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 DTD2Q96FN9 168 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ABHD17AQ96GS6 310 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 AMELYQ99218 206 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 VRK1Q99986 396 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SRA1Q9HD15 236 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 BCL2L10Q9HD36 194 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 NRIP3Q9NQ35 241 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 POLE3Q9NRF9 147 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 C14orf105Q9NVL8 296 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 NCDNQ9UBB6 729 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 INSL6Q9Y581 213 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 RNF215Q9Y6U7 377 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SCN5AQ14524 2016 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MEX3AA1L020 520 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 FITM1A5D6W6 292 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CARNS1A5YM72 827 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 EEF1E1-BLOC1S5C9J1V9 151 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 HRKO00198 91 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 GSTZ1O43708 216 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 EIF4E2O60573 245 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PRAMEF2O60811 474 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 LYPD3O95274 346 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 LY86O95711 162 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 F13BP05160 661 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ANXA2P07355 339 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CTSBP07858 339 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF806P0C7X5 589 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF888P0CJ79 500 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CSNK2A2P19784 350 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ITGB8P26012 769 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 RPL4P36578 427 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PTGFRP43088 359 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MEOX2P50222 304 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CAPZA1P52907 286 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MOGAT2Q3SYC2 334 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms