RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 HSPA12AO43301 675 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CHST10O43529 356 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 KCNK5O95279 499 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CNOT4O95628 575 aaKnown RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 DIRAS3O95661 229 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 IFNA17P01571 189 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 EPXP11678 715 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 PRPS2P11908 318 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CD79AP11912 226 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 BMP7P18075 431 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 GALP22466 123 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 STAT5AP42229 794 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 AP3S2P59780 193 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 PFN3P60673 137 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 RPS14P62263 151 aaKnown RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 IL10RAQ13651 578 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 PLEKHN1Q494U1 663 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF805Q5CZA5 627 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 DCAF10Q5QP82 559 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 EXOSC6Q5RKV6 272 aaKnown RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 C9orf64Q5T6V5 341 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 RIPPLY2Q5TAB7 128 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 FRG2Q64ET8 278 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 C12orf73Q69YU5 71 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3CQ6IPX1 549 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 DOK6Q6PKX4 331 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 IL34Q6ZMJ4 242 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 LRRTM1Q86UE6 522 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 NR2C2APQ86WQ0 139 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CXorf67Q86X51 503 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TBC1D3Q8IZP1 549 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 KCNRGQ8N5I3 272 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 SAMD12Q8N8I0 201 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 SDR9C7Q8NEX9 313 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 OR1J4Q8NGS1 313 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CMTM7Q96FZ5 175 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TPD52L3Q96J77 140 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 FRG2BQ96QU4 278 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 OR1F2PQ96R84 312 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 F2RL3Q96RI0 385 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 MTERF1Q99551 399 aaKnown RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 LAT2Q9GZY6 243 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ATG10Q9H0Y0 220 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 MMP26Q9NRE1 261 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 LRFN1Q9P244 771 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 IL36AQ9UHA7 158 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 PTPRSQ13332 1948 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ARRDC5A6NEK1 342 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TMEM202A6NGA9 273 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 LRRN3E7EW58 273 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 MAN2B1O00754 1011 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 RFXANKO14593 260 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CTDSPLO15194 276 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 BCL2L11O43521 198 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 GUSBP08236 651 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 METTL15P1P0C7V9 234 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ADH5P11766 374 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 EPCAMP16422 314 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TACR1P25103 407 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 MAS1LP35410 378 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 MAGEB1P43366 347 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 LUMP51884 338 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 NRG3P56975 720 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 INSM1Q01101 510 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 VEZF1Q14119 521 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF345Q14585 488 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TESK1Q15569 626 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 NKPD1Q17RQ9 610 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ZNF385CQ66K41 422 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CDC73Q6P1J9 531 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 CEACAM20Q6UY09 585 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 DPPA4Q7L190 304 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 PEG10Q86TG7 708 aaKnown RBP8.09□□□□□ -1.11
ATG4A-203ENST00000372232 OR10A7Q8NGE5 316 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 THAP4Q8WY91 577 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 APIPQ96GX9 242 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 FAM83CQ9BQN1 747 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 WDR13Q9H1Z4 485 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 LRRN3Q9H3W5 708 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 FKRPQ9H9S5 495 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 PARD6AQ9NPB6 346 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 TMEM100Q9NV29 134 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 ZSCAN32Q9NX65 697 aa8.09□□□□□ -1.11
ATG4A-203ENST00000372232 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 CDC14CA4D256 554 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 SYNDIG1LA6NDD5 238 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 A6NIN4 97 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 M0QZK8 103 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 TMEM127O75204 238 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 WISP1O95388 367 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 PAPLNO95428 1278 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 CISD3P0C7P0 127 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 AMD1P17707 334 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 SDC1P18827 310 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 AGTR1P30556 359 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 S100A3P33764 101 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 CDKN1BP46527 198 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 LIMS1P48059 325 aa8.08□□□□□ -1.12
ATG4A-203ENST00000372232 TDGF1P3P51864 188 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms