RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 MRPL49Q13405 166 aaKnown RBP14.69□□□□□ -0.06
COL17A1-202ENST00000369733 MEP1BQ16820 701 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 CMTM4Q8IZR5 234 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR52H1Q8NGJ2 320 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR13C5Q8NGS8 318 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 LDAHQ9H6V9 325 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 A0A1B0GUH1 482 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR2F2O95006 317 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 PRPH2P23942 346 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 RAB38P57729 211 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR2F1Q13607 317 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 TMEM64Q6YI46 380 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 SYT9Q86SS6 491 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR6M1Q8NGM8 313 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 YIPF5Q969M3 257 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 MARCH5Q9NX47 278 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 PLEK2Q9NYT0 353 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 TRIM64A6NGJ6 449 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 TRIM64BA6NI03 449 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 SEMA4FO95754 770 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 RAC2P15153 192 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
COL17A1-202ENST00000369733 SOHLH1Q5JUK2 328 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 KDM8Q8N371 416 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 FRMD1Q8N878 549 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 RELL2Q8NC24 303 aaPredicted RBP14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR4Q3Q8NH05 313 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 FBRSQ9HAH7 460 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 CMC2Q9NRP2 79 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 EMC9Q9Y3B6 208 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 WIF1Q9Y5W5 379 aa14.69□□□□□ -0.06
COL17A1-202ENST00000369733 OR6C6A6NF89 314 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 ETHE1O95571 254 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 CD53P19397 219 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 ITGB8P26012 769 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 NDUFA6P56556 154 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 CNN3Q15417 329 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 IL17RCQ8NAC3 791 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 ZNF681Q96N22 645 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 LPAR4Q99677 370 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 MRPS28Q9Y2Q9 187 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 LPLP06858 475 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 HOXB9P17482 250 aaPredicted RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 MAOBP27338 520 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 MAGEB1P43366 347 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 UBE2MP61081 183 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 SNTB1Q13884 538 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 SMAD2Q15796 467 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 FAM57BQ71RH2 274 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 MRPL41Q8IXM3 137 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 KLHL13Q9P2N7 655 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 CDC14CA4D256 554 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 F11P03951 625 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 SPI1P17947 270 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 AUNIPQ9H7T9 357 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 TUBG2Q9NRH3 451 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 ECM29Q5VYK3 1845 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 CD14P08571 375 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 Q6ZSR6 202 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 CDH26Q8IXH8 852 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 MS4A4AQ96JQ5 239 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 CMSS1Q9BQ75 279 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 ISG20L2Q9H9L3 353 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 EXOSC3Q9NQT5 275 aaKnown RBP14.68□□□□□ -0.06
COL17A1-202ENST00000369733 RNF186Q9NXI6 227 aa14.68□□□□□ -0.06
COL17A1-202ENST00000369733 PRAMEF27A3QJZ7 478 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 BLACEA4D250 179 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 P2RY10O00398 339 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 LIM2P55344 173 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 PRAMEF9Q5VWM5 478 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 PLXDC1Q8IUK5 500 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 MSRB3Q8IXL7 192 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 LRIT2A6NDA9 550 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 IHHQ14623 411 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 FBXW12Q6X9E4 464 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 KLHDC8BQ8IXV7 354 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 PRR18Q8N4B5 295 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 SLC22A24Q8N4F4 322 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 KCNG3Q8TAE7 436 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 RAB22AQ9UL26 194 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 AIPO00170 330 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 SUSD5O60279 629 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 B3GALNT1O75752 331 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 CLLU1Q5K131 121 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 KCNRGQ8N5I3 272 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 RCBTB1Q8NDN9 531 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 RNF32Q9H0A6 362 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 PLEKHA3Q9HB20 300 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 SCN7AQ01118 1682 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 PEX12O00623 359 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 OMGP23515 440 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 DUSP5Q16690 384 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 IAH1Q2TAA2 248 aaPredicted RBP14.67□□□□□ -0.06
COL17A1-202ENST00000369733 RHOUQ7L0Q8 258 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 RSPRY1Q96DX4 576 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 WDFY2Q96P53 400 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 CCL26Q9Y258 94 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 TUBGCP6Q96RT7 1819 aa14.67□□□□□ -0.06
COL17A1-202ENST00000369733 NSA2O95478 260 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms