RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 LRRTM1Q86UE6 522 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ZNF619Q8N2I2 560 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 LRRC25Q8N386 305 aaPredicted RBP13.15□□□□□ -0.3
PHTF1-204ENST00000369604 OR1J2Q8NGS2 313 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 PPP1R1CQ8WVI7 109 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 RNF186Q9NXI6 227 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 SCN2AQ99250 2005 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 A0A1B0GTH9 108 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 CAPZA1P52907 286 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 RAB5BP61020 215 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 SRSF3P84103 164 aaKnown RBP13.15□□□□□ -0.3
PHTF1-204ENST00000369604 RAB33AQ14088 237 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ARHGAP11BQ3KRB8 267 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 RBMS3Q6XE24 437 aaKnown RBP13.15□□□□□ -0.3
PHTF1-204ENST00000369604 TCEAL8Q8IYN2 117 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ARL11Q969Q4 196 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ADAD1Q96M93 576 aaKnown RBP13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ATG5Q9H1Y0 275 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 TNFSF18Q9UNG2 199 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.15□□□□□ -0.3
PHTF1-204ENST00000369604 DENND4AQ7Z401 1863 aa13.15□□□□□ -0.3
PHTF1-204ENST00000369604 VEGFDO43915 354 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 NID1P14543 1247 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 DIO1P49895 249 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 PRKXP51817 358 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ATP1B3P54709 279 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 SREBF2Q12772 1141 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 TSC22D1Q15714 1073 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 PRRT3Q5FWE3 981 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 DHRS7BQ6IAN0 325 aaPredicted RBP13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ACOT7LQ6ZUV0 252 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF627Q7L945 461 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF681Q96N22 645 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 POTEKPQ9BYX7 375 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 PITHD1Q9GZP4 211 aaPredicted RBP13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF346Q9UL40 294 aaKnown RBP13.14□□□□□ -0.31
PHTF1-204ENST00000369604 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 MCIDASD6RGH6 385 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 PCCBP05166 539 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 MICBQ29980 383 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 TRMT12Q53H54 448 aaKnown RBP13.14□□□□□ -0.31
PHTF1-204ENST00000369604 DCST2Q5T1A1 773 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 PGAP1Q75T13 922 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 A0A1B0GWA3 101 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 TMEM72A0PK05 275 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 NDUFB2O95178 105 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ACTL6AO96019 429 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
PHTF1-204ENST00000369604 THBS1P07996 1170 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 AQP2P41181 271 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 TCTN1Q2MV58 587 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 PLEKHN1Q494U1 663 aaPredicted RBP13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ALG10BQ5I7T1 473 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 GABRG1Q8N1C3 465 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 OR2A1Q8NGT9 310 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 LMF1Q96S06 567 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 ULBP3Q9BZM4 244 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 GSN-AS1Q9NRJ2 163 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 GTF2A1LQ9UNN4 478 aa13.14□□□□□ -0.31
PHTF1-204ENST00000369604 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 TRAV8-7A0A075B6U6 113 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 EEF1E1-BLOC1S5C9J1V9 151 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 TACSTD2P09758 323 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 RBM39Q14498 530 aaKnown RBP13.13□□□□□ -0.31
PHTF1-204ENST00000369604 ARHGAP40Q5TG30 622 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 OR10R2Q8NGX6 335 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 TMEM106AQ96A25 262 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 ZBTB8AQ96BR9 441 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 PHYHIPLQ96FC7 376 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 MRGPRX3Q96LB0 322 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 RSPH9Q9H1X1 276 aaPredicted RBP13.13□□□□□ -0.31
PHTF1-204ENST00000369604 ARID1AO14497 2285 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 PLXNA2O75051 1894 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.13□□□□□ -0.31
PHTF1-204ENST00000369604 CTAG2O75638 210 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 POU3F4P49335 361 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 NTHL1P78549 312 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 AIMP2Q13155 320 aaKnown RBP13.13□□□□□ -0.31
PHTF1-204ENST00000369604 PEA15Q15121 130 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 IRF4Q15306 451 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 TMEM205Q6UW68 189 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 KCTD9Q7L273 389 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 TMPRSS9Q7Z410 1059 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 ZPLD1Q8TCW7 415 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 CASTOR1Q8WTX7 329 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 TRIM43Q96BQ3 446 aaPredicted RBP13.13□□□□□ -0.31
PHTF1-204ENST00000369604 RASD2Q96D21 266 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 TINAGL1Q9GZM7 467 aaPredicted RBP13.13□□□□□ -0.31
PHTF1-204ENST00000369604 SPHK2Q9NRA0 654 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 RXFP3Q9NSD7 469 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 STEAP1Q9UHE8 339 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
PHTF1-204ENST00000369604 LRRC72A6NJI9 287 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms