RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 MAGIXQ9H6Y5 334 aa13.27□□□□□ -0.29
SMPDL3A-201ENST00000368440 MCCC2Q9HCC0 563 aa13.27□□□□□ -0.29
SMPDL3A-201ENST00000368440 TAS2R16Q9NYV7 291 aa13.27□□□□□ -0.29
SMPDL3A-201ENST00000368440 TRAV27A0A087WT01 109 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 FAM221AA4D161 298 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 SLC43A1O75387 559 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 CTAG2O75638 210 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 RAP2AP10114 183 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 SAGP10523 405 aaPredicted RBP13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 BIDP55957 195 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 RPS4XP62701 263 aaKnown RBP13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 CAMK2DQ13557 499 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 TAB1Q15750 504 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 STK11Q15831 433 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 TMEM200AQ86VY9 491 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 WFDC8Q8IUA0 241 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 GALNT4Q8N4A0 578 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 OR4K5Q8NGD3 323 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 EME1Q96AY2 570 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 CIB1Q99828 191 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 LINC00470Q9BZP3 86 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 HIF3AQ9Y2N7 669 aa13.26□□□□□ -0.29
SMPDL3A-201ENST00000368440 PRR14LQ5THK1 2151 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 SH3PXD2BA1X283 911 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 DEFB108AA8MXU0 73 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 EFCAB9A8MZ26 197 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 AKAP8O43823 692 aaKnown RBP13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 PPP3CBP16298 524 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 CRYGSP22914 178 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 GABRA6Q16445 453 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 SEZ6L2Q6UXD5 910 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 TMPRSS11FQ6ZWK6 438 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 RRM2BQ7LG56 351 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 OR51A7Q8NH64 312 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 ZNF837Q96EG3 531 aaPredicted RBP13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 ZNF347Q96SE7 839 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 VNN3Q9NY84 501 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 A0A1W2PPR1 153 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 A0A1W2PR80 420 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 CIB4A0PJX0 185 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 ZNF587BE7ETH6 402 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 CASKO14936 926 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 CASQ2O14958 399 aaPredicted RBP13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 CLOCKO15516 846 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 KRT33AO76009 404 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 CDH2P19022 906 aaPredicted RBP13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 MPGP29372 298 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 OMPP47874 163 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 LIMS1P48059 325 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 ROR2Q01974 943 aaKnown RBP13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 PPP1R8Q12972 351 aaKnown RBP13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 TAF11Q15544 211 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 OGFRL1Q5TC84 451 aaPredicted RBP13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 IGFN1Q86VF2 1251 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 DNAJC9Q8WXX5 260 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 TNFRSF13CQ96RJ3 184 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 GPA33Q99795 319 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 INIPQ9NRY2 104 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 RASSF1Q9NS23 344 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 ZNF226Q9NYT6 803 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 ABCA12Q86UK0 2595 aa13.25□□□□□ -0.29
SMPDL3A-201ENST00000368440 CSMD2Q7Z408 3487 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 HTR3EA5X5Y0 456 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 OR5H1A6NKK0 313 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 M0R3G1 203 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 KLF4O43474 513 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 HRGP04196 525 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 ZNF26P17031 533 aaPredicted RBP13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 LOXP28300 417 aaPredicted RBP13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 AQP4P55087 323 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 RUNX1T1Q06455 604 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 OAFQ86UD1 273 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 C20orf196Q8IYI0 205 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 GPR137CQ8N3F9 429 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 LRRC75AQ8NAA5 344 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 PAPD5Q8NDF8 572 aaKnown RBP13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 HS3ST6Q96QI5 342 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 ALPK1Q96QP1 1244 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 VCX3BQ9H321 246 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 LYVE1Q9Y5Y7 322 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 LRBAP50851 2863 aa13.24□□□□□ -0.29
SMPDL3A-201ENST00000368440 OR6C65A6NJZ3 312 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 ZNF726A6NNF4 738 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 GNGT2O14610 69 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 CST1P01037 141 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 FCGR1AP12314 374 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 SMIM11AP58511 58 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 ACKR1Q16570 336 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 ALG10Q5BKT4 473 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 ZER1Q7Z7L7 766 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 CDK20Q8IZL9 346 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 OR52N5Q8NH56 324 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 ASB10Q8WXI3 467 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 PIK3IP1Q96FE7 263 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
SMPDL3A-201ENST00000368440 CRLF2Q9HC73 371 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms