RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SIVA1O15304 175 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 BCAR3O75815 825 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 NEURL1O76050 574 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 NFATC1O95644 943 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SERPINA1P01009 418 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 EGFP01133 1207 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 TFP02787 698 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 HOXB5P09067 269 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 RAB40ALP0C0E4 278 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SNHG28P0DPA3 235 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 THRAP10827 490 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 TSPAN8P19075 237 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CXCR2P25025 360 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CD82P27701 267 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CFHR2P36980 270 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ASCL1P50553 236 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 BLKP51451 505 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 DNA2P51530 1060 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CCL11P51671 97 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 GPR143P51810 404 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 PRKXP51817 358 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CLDN18P56856 261 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 TMPRSS3P57727 454 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 GNG2P59768 71 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 PPIAP62937 165 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 LCN2P80188 198 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CKAP4Q07065 602 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 IGFBP7Q16270 282 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ACKR1Q16570 336 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 HIST2H2ACQ16777 129 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SLC36A2Q495M3 483 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 AGKQ53H12 422 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 OR2G6Q5TZ20 316 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 TMEM268Q5VZI3 342 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ZNF544Q6NX49 715 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ZFP1Q6P2D0 407 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 RHBDF2Q6PJF5 856 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ASB18Q6ZVZ8 466 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 YTHDF3Q7Z739 585 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SETD3Q86TU7 594 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 TBC1D26Q86UD7 250 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CACUL1Q86Y37 369 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 TDRPQ86YL5 185 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CBWD2Q8IUF1 395 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 MFSD6LQ8IWD5 586 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ZC3H3Q8IXZ2 948 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SPAG16Q8N0X2 631 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 Q8N402 240 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 GALNT16Q8N428 558 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 RIBC1Q8N443 379 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ZNF561Q8N587 486 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SIDT2Q8NBJ9 832 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 OR4D10Q8NGI6 311 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 VANGL1Q8TAA9 524 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 OLIG1Q8TAK6 271 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 RPL3LQ92901 407 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 FGF11Q92914 225 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 NAT6Q93015 286 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 MARC2Q969Z3 335 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SLC35C1Q96A29 364 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 FBXO17Q96EF6 278 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SENP5Q96HI0 755 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 PRAP1Q96NZ9 151 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 QKIQ96PU8 341 aaKnown RBP eCLIP4.52□□□□□ -1.693e-7■■■■□ 24.7
ECHDC1-204ENST00000368292 RASL10BQ96S79 203 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ACOX2Q99424 681 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 C17orf62Q9BQA9 187 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ZNF426Q9BUY5 554 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ULBP2Q9BZM5 246 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 NMUR2Q9GZQ4 415 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ACTL8Q9H568 366 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 NMUR1Q9HB89 426 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 MOV10Q9HCE1 1003 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SIRT7Q9NRC8 400 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 NECAP2Q9NVZ3 263 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 SMOXQ9NWM0 555 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 RNF150Q9ULK6 438 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 GSTK1Q9Y2Q3 226 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 ZNF337Q9Y3M9 751 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 CSNK1G3Q9Y6M4 447 aa4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 TDRD15B5MCY1 1934 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 NUP210Q8TEM1 1887 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-204ENST00000368292 C5orf60A6NFR6 353 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 C2CD4BA6NLJ0 364 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 RFPL4AA6NLU0 287 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 FAM157AC9JC47 383 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 HHLA1C9JL84 531 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 RFPL4AL1F8VTS6 287 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 M0R036 132 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 SURF4O15260 269 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 LATO43561 262 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 LDB2O43679 373 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 GMDSO60547 372 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 TPST2O60704 377 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 HUS1O60921 280 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 CREG1O75629 220 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 AP2A2O94973 939 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 ETHE1O95571 254 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 ACSL3O95573 720 aa4.51□□□□□ -1.69
ECHDC1-204ENST00000368292 C9P02748 559 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms