RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 GOLGA8SH3BPF8 625 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 CST1P01037 141 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 ALDOBP05062 364 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 PCCAP05165 728 aaPredicted RBP2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 PPIAL4FP0DN26 164 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 ATP5C1P36542 298 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 VHLP40337 213 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 GYG1P46976 350 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 PLP1P60201 277 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 GNMTQ14749 295 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 GUCA2BQ16661 112 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 LRRC10Q5BKY1 277 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 ZYG11AQ6WRX3 759 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 NIPA1Q7RTP0 329 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 PLA2G4DQ86XP0 818 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 TGIF2LXQ8IUE1 241 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 CDH26Q8IXH8 852 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 CNPY4Q8N129 248 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 UBE2J2Q8N2K1 259 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF786Q8N393 782 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF557Q8N988 423 aaPredicted RBP2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 HSD17B11Q8NBQ5 300 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC22A8Q8TCC7 542 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 RNF139Q8WU17 664 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 SRSF12Q8WXF0 261 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 MED8Q96G25 268 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 SORT1Q99523 831 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 RARRES2Q99969 163 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 RIOK1Q9BRS2 568 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 IL26Q9NPH9 171 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC25A37Q9NYZ2 338 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 RRP15Q9Y3B9 282 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 CSDC2Q9Y534 153 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 HEBP2Q9Y5Z4 205 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 MSH6P52701 1360 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 MAP3K15Q6ZN16 1313 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 XKRY2A2RUG3 117 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 NKX2-6A6NCS4 301 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 UBXN8O00124 270 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 CCL21O00585 134 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 GOSR2O14653 212 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 PSTPIP1O43586 416 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 ICOSLGO75144 302 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 FGF1P05230 155 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 TDGF1P13385 188 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 CRISP2P16562 243 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 CNR1P21554 472 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 CASP14P31944 242 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 EPS15P42566 896 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 TDGF1P3P51864 188 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 HERVK_113P61574 105 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 HMGN5P82970 282 aaKnown RBP2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 MADCAM1Q13477 382 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 FRMPD2BQ6IN97 320 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 IGFL3Q6UXB1 125 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 Q6ZSR3 168 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 LINC00173Q6ZV60 143 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 UTS2BQ765I0 119 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 LHFPL3Q86UP9 236 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF429Q86V71 674 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 FAM228AQ86W67 206 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 CDR2LQ86X02 465 aaPredicted RBP2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 MDS2Q8NDY4 140 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 OR9K2Q8NGE7 335 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 OR6X1Q8NH79 312 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 N4BP2L2Q92802 583 aaPredicted RBP2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 STARD4Q96DR4 205 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 CNDP1Q96KN2 507 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC39A3Q9BRY0 314 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 HDHD3Q9BSH5 251 aaPredicted RBP2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 DNTTIP1Q9H147 329 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 INPP5EQ9NRR6 644 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 ETNK2Q9NVF9 386 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 KLHL28Q9NXS3 571 aa2.18□□□□□ -2.06
ECHDC1-201ENST00000368287 IGHV3-64DA0A0J9YX35 117 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 A0A1B0GVI7 797 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 TRIM64CA6NLI5 447 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF726A6NNF4 738 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 C11orf94C9JXX5 98 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 CD5LO43866 347 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 SUPT3HO75486 399 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 PALMO75781 387 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC25A27O95847 323 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 IGLV2-23P01705 113 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 GKN3PP0CG01 181 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC2A3P11169 496 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 FOLR1P15328 257 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 TCN1P20061 433 aaPredicted RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC2A5P22732 501 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 CMA1P23946 247 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 GPR6P46095 362 aaPredicted RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 CDKN1BP46527 198 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 YAP1P46937 504 aaKnown RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 RFX3P48380 749 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 NCBP2P52298 156 aaKnown RBP eCLIP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 SUCLG1P53597 346 aaKnown RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 FBXW4P57775 412 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 ERVK-25P63136 954 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 BST2Q10589 180 aaKnown RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 SGCAQ16586 387 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms