RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SMIM17P0DL12 118 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TIA1P31483 386 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 INSM1Q01101 510 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 LRRTM3Q86VH5 581 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SPON1Q9HCB6 807 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 PHPT1Q9NRX4 125 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 CLEC5AQ9NY25 188 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 AGO1Q9UL18 857 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 IQCF5A8MTL0 148 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ADH1BP00325 375 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 PRRX1P54821 245 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SKP2Q13309 424 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 GBX1Q14549 363 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF74Q16587 644 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF350Q9GZX5 532 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MED1Q15648 1581 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 GEMIN2O14893 280 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ATG4CQ96DT6 458 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 OSMRQ99650 979 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 BET1LQ9NYM9 111 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TEX13DA0A0J9YY54 714 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 A0A1W2PQL4 384 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 APLNRP35414 380 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MPLP40238 635 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 EMX1Q04741 257 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 LAMTOR4Q0VGL1 99 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 DUSP28Q4G0W2 176 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 GCNT2Q8N0V5 402 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 FAM181AQ8N9Y4 354 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 C5orf51A6NDU8 294 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 J3KR12 359 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TSPAN6O43657 245 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 PPP1R11O60927 126 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 GCM2O75603 506 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ASGR2P07307 311 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TSPAN31Q12999 210 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TEX29Q8N6K0 151 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 OR56B2PQ8NGI1 322 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 OR10K1Q8NGX5 313 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SLIRPQ9GZT3 109 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 CHST11Q9NPF2 352 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TVP23BQ9NYZ1 205 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 LPAR3Q9UBY5 353 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SEC11AP67812 179 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 IRF9Q00978 393 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SRSF7Q16629 238 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ACSM3Q53FZ2 586 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 PRR27Q6MZM9 219 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 RPS19BP1Q86WX3 136 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 KCND3Q9UK17 655 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MYO10Q9HD67 2058 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 CDIPTO14735 213 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SHMT2P34897 504 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TNFRSF14Q92956 283 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 PLSCR3Q9NRY6 295 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 OOEPA6NGQ2 149 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SLC37A1P57057 533 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 FBXW4P57775 412 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 SRSF5Q13243 272 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 AARDQ4LEZ3 155 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 NUFIP2Q7Z417 695 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 NKAIN4Q8IVV8 208 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 OR10AG1Q8NH19 301 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MRPS17Q9Y2R5 130 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 CLEC18AA5D8T8 446 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 AQP1P29972 269 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ELOA3BQ3SY89 546 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF678Q5SXM1 525 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 CLEC18CQ8NCF0 446 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ELOA3Q8NG57 546 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 LIN37Q96GY3 246 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 HES2Q9Y543 173 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 CST3P01034 146 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 AKR1A1P14550 325 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TBXA2RP21731 343 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 ACHEP22303 614 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 B2MP61769 119 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM176BQ3YBM2 270 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MDGA2Q7Z553 956 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 FBXO16Q8IX29 292 aaPredicted RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MDGA1Q8NFP4 955 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 LRFN1Q9P244 771 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 VDAC3Q9Y277 283 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MRPS16Q9Y3D3 137 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 CACNA1FO60840 1977 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GPR171O14626 319 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ST8SIA3O43173 380 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ARRB1P49407 418 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 RIDAP52758 137 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 GK5Q6ZS86 529 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 HAS1Q92839 578 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 R3HDM4Q96D70 268 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 MACROD1Q9BQ69 325 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TRMT61BQ9BVS5 477 aaKnown RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ADAMTS5Q9UNA0 930 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 NEU3Q9UQ49 428 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 TIMM8BQ9Y5J9 83 aaPredicted RBP3.47□□□□□ -1.85
SYNE1-207ENST00000367255 DIP2BQ9P265 1576 aa3.47□□□□□ -1.85
SYNE1-207ENST00000367255 ACOT8O14734 319 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms