RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MICU1Q9BPX6 476 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 MARVELD1Q9BSK0 173 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 TRBV5-3A0A0A0MS03 114 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 CRYBB2P43320 205 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 HSD17B7P56937 341 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 ACY1Q03154 408 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 EGR3Q06889 387 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 YOD1Q5VVQ6 348 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 TMEM200AQ86VY9 491 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 CERS4Q9HA82 394 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF304Q9HCX3 659 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 RPS10P5Q9NQ39 176 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 NKX6-1P78426 367 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 TMUB2Q71RG4 321 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 OR1F2PQ96R84 312 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 FBXO7Q9Y3I1 522 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 TK1P04183 234 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 POU3F4P49335 361 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 PCBP3P57721 371 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 MRPS21P82921 87 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 KIAA0040Q15053 153 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 KCMF1Q9P0J7 381 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 CCL26Q9Y258 94 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF133P52736 654 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 PRICKLE2Q7Z3G6 844 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 SLC22A11Q9NSA0 550 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 FAM171A2A8MVW0 826 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 TPMTP51580 245 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 PPA1Q15181 289 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 CCSMST1Q4G0I0 132 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 SUMF2Q8NBJ7 301 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 PAQR8Q8TEZ7 354 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 ATF6BQ99941 703 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 GPR174Q9BXC1 333 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 TSTD3H0UI37 97 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 FADS1O60427 444 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF254O75437 659 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 TRAPPC6AO75865 159 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 ADRB1P08588 477 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 FLI1Q01543 452 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 OC90Q02509 493 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 DOC2BQ14184 412 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 OR9A4Q8NGU2 314 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 OR4K15Q8NH41 348 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 ARRDC3Q96B67 414 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
CDC42BPA-202ENST00000366764 CPED1A4D0V7 1026 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF35P13682 527 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 DLX2Q07687 328 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 AVPI1Q5T686 147 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 DPY19L4Q7Z388 723 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ESX1Q8N693 406 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 SPNS1Q9H2V7 528 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 FZD3Q9NPG1 666 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 TMX2-CTNND1H3BSU7 103 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 CHRM4P08173 479 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 TRAPPC6BQ86SZ2 158 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 MOB1AQ9H8S9 216 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 THAP10Q9P2Z0 257 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 CTNSO60931 367 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 IGHA2P01877 340 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 HBE1P02100 147 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 FBXO45P0C2W1 286 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 HOXC8P31273 242 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 KIR2DL3P43628 341 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 CAV2P51636 162 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 HCCSP53701 268 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 CLDN6P56747 220 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 CDK5R1Q15078 307 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 C18orf63Q68DL7 685 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 OR7E24Q6IFN5 339 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 UCN3Q969E3 161 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ARL5BQ96KC2 179 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 SDF2Q99470 211 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 PTPRDP23468 1912 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 KCNE1BA0A087WTH5 132 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 KNG1P01042 644 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 HEPHL1Q6MZM0 1159 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 KDM8Q8N371 416 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 MAN2C1Q9NTJ4 1040 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 UPK1AO00322 258 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 TAAR5O14804 337 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 WISP3O95389 354 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 IFNA4P05014 189 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 IL5P05113 134 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ELFN2Q5R3F8 820 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 NMNAT3Q96T66 252 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 CHRDQ9H2X0 955 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 LOC285556D6RIA3 1793 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF593O00488 134 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 GPR171O14626 319 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 WNT3P56703 355 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 CLLU1Q5K131 121 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 C1orf198Q9H425 327 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ABCA1O95477 2261 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 A0A1W2PR48 441 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 ACHEP22303 614 aa10.87□□□□□ -0.67
CDC42BPA-202ENST00000366764 LIM2P55344 173 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms