RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SFRP5Q5T4F7 317 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 ALKBH2Q6NS38 261 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 NHLRC1Q6VVB1 395 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 PXKQ7Z7A4 578 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 MCATQ8IVS2 390 aaKnown RBP12.77□□□□□ -0.37
COL6A1-201ENST00000361866 OR1J4Q8NGS1 313 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 OR5H2Q8NGV7 314 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 S100PBPQ96BU1 408 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 WDR89Q96FK6 387 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-201ENST00000361866 URM1Q9BTM9 101 aaKnown RBP12.77□□□□□ -0.37
COL6A1-201ENST00000361866 FANCFQ9NPI8 374 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 RHBDD3Q9Y3P4 386 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 SCN2AQ99250 2005 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 CPED1A4D0V7 1026 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 CTNSO60931 367 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 PCBP4P57723 403 aaKnown RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 CLRN1P58418 232 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 VAMP2P63027 116 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 DMRTC1Q5HYR2 192 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 C3orf33Q6P1S2 294 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF440Q8IYI8 595 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 OR11H7Q8NGC8 314 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 OR5D18Q8NGL1 313 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 ANGPTL6Q8NI99 470 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 C2CD4CQ8TF44 421 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 TMEM231Q9H6L2 316 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 C2orf42Q9NWW7 574 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 LRIT1Q9P2V4 623 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 SERINC4A6NH21 518 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 CA3P07451 260 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 GIPP09681 153 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 RAB6AP20340 208 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 RORAP35398 523 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 MAP2K6P52564 334 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 CRYBA2P53672 197 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 MELKQ14680 651 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 LRRC69Q6ZNQ3 347 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 BPHLQ86WA6 291 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 C9orf62Q8N4C0 152 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 PARP12Q9H0J9 701 aaKnown RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 EMC9Q9Y3B6 208 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 A0A1B0GTH9 108 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF850A8MQ14 1090 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 C1orf196B1AJZ1 125 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 TPT1P13693 172 aaKnown RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 HNRNPA2B1P22626 353 aaKnown RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 CCNOP22674 350 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 HTR2CP28335 458 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 FXYD4P59646 89 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 RAB2AP61019 212 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF77Q15935 545 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 OR4N2Q8NGD1 307 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 SLC6A18Q96N87 628 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 TOX2Q96NM4 488 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 POLMQ9NP87 494 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-201ENST00000361866 PPIL1Q9Y3C6 166 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 SVILO95425 2214 aa12.76□□□□□ -0.37
COL6A1-201ENST00000361866 AHCTF1Q8WYP5 2266 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TMEM235A6NFC5 223 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 AIPO00170 330 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 SNRNP70P08621 437 aaKnown RBP12.75□□□□□ -0.37
COL6A1-201ENST00000361866 THEGLP0DJG4 465 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 MAOAP21397 527 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 SELENOPP49908 381 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TLE3Q04726 772 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 SVBPQ8N300 66 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 AVL9Q8NBF6 648 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 OR4K17Q8NGC6 315 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 ELP5Q8TE02 316 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 POFUT1Q9H488 388 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
COL6A1-201ENST00000361866 PPP1R3EQ9H7J1 279 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 PRDM7Q9NQW5 492 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 POMT2Q9UKY4 750 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 A0A0A6YYD5 115 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF254O75437 659 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 PET100P0DJ07 73 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 DUSP8Q13202 625 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 GSG1Q2KHT4 349 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 WBP2NLQ6ICG8 309 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 Q6ZTK2 550 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 ABHD12BQ7Z5M8 362 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 MORN4Q8NDC4 146 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TMEM234Q8WY98 164 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 PRRT1Q99946 306 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 UBQLN4Q9NRR5 601 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 C19orf53Q9UNZ5 99 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-201ENST00000361866 A0A0J9YY10 115 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TSPAN15O95858 294 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 PPT1P50897 306 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 EMP2P54851 167 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 DYRK1AQ13627 763 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 RUNX2Q13950 521 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms