RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FAM183AA6NL82 134 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 INMT-MINDY4F8WBC2 141 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 GFRA3O60609 400 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 C1QBP02746 253 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 FAM157BP0CG42 384 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 PNMTP11086 282 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 IFI30P13284 250 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 P2RX1P51575 399 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 MRPL28Q13084 256 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 CBFBQ13951 182 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 NTRK2Q16620 822 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 HACD4Q5VWC8 232 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 VASNQ6EMK4 673 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 TRILQ7L0X0 811 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 DND1Q8IYX4 353 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 LNX2Q8N448 690 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 OR5W2Q8NH69 310 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 DUSP19Q8WTR2 217 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 HGDQ93099 445 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 BEX2Q9BXY8 128 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 CDCP1Q9H5V8 836 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 METTL7AQ9H8H3 244 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 ISG20L2Q9H9L3 353 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 PLSCR3Q9NRY6 295 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 CYSLTR2Q9NS75 346 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 MED13Q9UHV7 2174 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 A6NL46 340 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ELOA3DA6NLF2 546 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 PRR23D1E9PI22 279 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ALX3O95076 343 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 PRR23D2P0DMB1 279 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ELK1P19419 428 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 GZMKP49863 264 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 SSR4P51571 173 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 CTBP2P56545 445 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 RRAS2P62070 204 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 BTG1P62324 171 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 MAB21L1Q13394 359 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ELOA3BQ3SY89 546 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 PAMR1Q6UXH9 720 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ELOA3Q8NG57 546 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 BPIFA2Q96DR5 249 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 DPH1Q9BZG8 443 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 CPAMD8Q8IZJ3 1885 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 A0A087WUJ7 227 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 BHLHE40O14503 412 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 GMFGO60234 142 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 SERPINA7P05543 415 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 SRSF6Q13247 344 aaKnown RBP11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 TNK1Q13470 666 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 CAMK2BQ13554 666 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 INSL4Q14641 139 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 KLHL12Q53G59 568 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 LINC00114Q6XXX2 140 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 TMEM156Q8N614 296 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 OR10H4Q8NGA5 316 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ADAMTS17Q8TE56 1095 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 AKAP1Q92667 903 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■□□□□ 9.1
SQSTM1-201ENST00000360718 RFT1Q96AA3 541 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 C3orf49Q96BT1 292 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 WACQ9BTA9 647 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ZNF426Q9BUY5 554 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 CMC2Q9NRP2 79 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 ICAM5Q9UMF0 924 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 BAIAP2Q9UQB8 552 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 HRH3Q9Y5N1 445 aa11.91□□□□□ -0.5
SQSTM1-201ENST00000360718 DCDC2BA2VCK2 349 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 PLPP2O43688 288 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 SAGP10523 405 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 GP1BBP13224 206 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 ARSBP15848 533 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 MST1P26927 711 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 PITPNBP48739 271 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 RPS7P62081 194 aaKnown RBP11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 CHAF1BQ13112 559 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 TMPRSS11FQ6ZWK6 438 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 OR10G3Q8NGC4 313 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 PFN4Q8NHR9 129 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 THAP7Q9BT49 309 aaPredicted RBP11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 IFT27Q9BW83 186 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 WDR70Q9NW82 654 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 C2orf72A6NCS6 295 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 RIIAD1A6NNX1 92 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 GNB5O14775 395 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 WISP1O95388 367 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 MLF1P58340 268 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 GNG2P59768 71 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 ARPC4P59998 168 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 FOXK2Q01167 660 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 IL20RBQ6UXL0 311 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 TMEM99Q8N816 258 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 SLC37A3Q8NCC5 494 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 TMEM234Q8WY98 164 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 UPRTQ96BW1 309 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 TEAD3Q99594 435 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms