RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GINS1Q14691 196 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 ZIK1Q3SY52 487 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 CLEC12AQ5QGZ9 265 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 TMEM201Q5SNT2 666 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 EEF1A1P5Q5VTE0 462 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 GPR139Q6DWJ6 353 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 ACSM5Q6NUN0 579 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC27A4Q6P1M0 643 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 FAM214BQ7L5A3 538 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 FAM26EQ8N5C1 309 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 NAXEQ8NCW5 288 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 OR2T33Q8NG76 320 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 OR6X1Q8NH79 312 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 ASB10Q8WXI3 467 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 Q96M85 177 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 TSPAN32Q96QS1 320 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 MBOAT4Q96T53 435 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 IFT27Q9BW83 186 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 POLDIP3Q9BY77 421 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 GRIP2Q9C0E4 1043 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 VCXQ9H320 206 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 VCX3BQ9H321 246 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 TOR3AQ9H497 397 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC25A19Q9HC21 320 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 MED29Q9NX70 200 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 SMPD3Q9NY59 655 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 ADAM18Q9Y3Q7 739 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 MYO7BQ6PIF6 2116 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 RELNP78509 3460 aa11.01□□□□□ -0.65
NIF3L1-201ENST00000359683 COL12A1Q99715 3063 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC35F4A4IF30 521 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 ZAR1LA6NP61 321 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 SERPINI2O75830 405 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 TMIGD3P0DMS9 266 aaPredicted RBP11□□□□□ -0.65
NIF3L1-201ENST00000359683 SDHAP31040 664 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 PER3P56645 1201 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 FOXF2Q12947 444 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 SNCBQ16143 134 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 NUFIP2Q7Z417 695 aaKnown RBP11□□□□□ -0.65
NIF3L1-201ENST00000359683 WDFY1Q8IWB7 410 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 GCNT2Q8N0V5 402 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 ARIH2OSQ8N7S6 290 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 PRR7Q8TB68 274 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF519Q8TB69 540 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 ADAD1Q96M93 576 aaKnown RBP11□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF570Q96NI8 536 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 ERMAPQ96PL5 475 aaPredicted RBP11□□□□□ -0.65
NIF3L1-201ENST00000359683 EMC6Q9BV81 110 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 RIBC2Q9H4K1 309 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 PARPBPQ9NWS1 579 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 GRHPRQ9UBQ7 328 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 RCE1Q9Y256 329 aa11□□□□□ -0.65
NIF3L1-201ENST00000359683 NOSIPQ9Y314 301 aaKnown RBP11□□□□□ -0.65
NIF3L1-201ENST00000359683 A0A0G2JNJ9 132 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF726A6NNF4 738 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 HSPB2A8KAH6 182 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC16A6O15403 523 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 TNFSF13O75888 250 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 IL18BPO95998 194 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 HMGN1P05114 100 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 CTSSP25774 331 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 GRK5P34947 590 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 VHLP40337 213 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 SMSP52788 366 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 BIDP55957 195 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 MYBPC1Q00872 1141 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 MELKQ14680 651 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 HSPB2Q16082 182 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 PGGHGQ32M88 737 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF362Q5T0B9 420 aaPredicted RBP10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 SLX4IPQ5VYV7 408 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 TMEM236Q5W0B7 351 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 FAM205BPQ63HN1 556 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 NCCRP1Q6ZVX7 275 aaPredicted RBP10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 AAED1Q7RTV5 226 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 IQCF1Q8N6M8 205 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 RND1Q92730 232 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC25A44Q96H78 314 aaPredicted RBP10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 HRASLS5Q96KN8 279 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 OR2M2Q96R28 347 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 MRPL13Q9BYD1 178 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 PLSCR4Q9NRQ2 329 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 FAM118AQ9NWS6 357 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 Q9UFV3 132 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 EMC9Q9Y3B6 208 aa10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 INTS1Q8N201 2190 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-201ENST00000359683 A6NIZ1 184 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 CENPBD1B2RD01 187 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 LRRTM2O43300 516 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 AKAP8O43823 692 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 MRPL33O75394 65 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 ACADSP16219 412 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 ACVR1BP36896 505 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 SELENOPP49908 381 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 RAP1BP61224 184 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 RAP1AP62834 184 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 RUNX1T1Q06455 604 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 TOP3AQ13472 1001 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 C4orf17Q53FE4 359 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms