RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 EMC8O43402 210 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 SUSD5O60279 629 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 LDB3O75112 727 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ETFAP13804 333 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ANXA7P20073 488 aaKnown RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 SOAT1P35610 550 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 RAD52P43351 418 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PSMA6P60900 246 aaKnown RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 RNF4P78317 190 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 COL9A2Q14055 689 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 IL11RAQ14626 422 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 NCF4Q15080 339 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 GSG1Q2KHT4 349 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 EXOSC6Q5RKV6 272 aaKnown RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 CDCP2Q5VXM1 449 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 CD276Q5ZPR3 534 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 FAHD1Q6P587 224 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 TMUB2Q71RG4 321 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PRSS58Q8IYP2 241 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 MEIOBQ8N635 442 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 OR56A1Q8NGH5 318 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 AP3S1Q92572 193 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ZC3HAV1LQ96H79 300 aaKnown RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 GAL3ST1Q99999 423 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 OCIAD1Q9NX40 245 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PTGFRNQ9P2B2 879 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 RARRES3Q9UL19 164 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 MRPS33Q9Y291 106 aaKnown RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 A0A087WV62 115 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF593O00488 134 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 CLN5O75503 358 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 GASTP01350 101 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 GALNSP34059 522 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 RORAP35398 523 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 BIKQ13323 160 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PRICKLE4Q2TBC4 344 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF385CQ66K41 422 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 H3F3CQ6NXT2 135 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 SLC30A6Q6NXT4 461 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 SEZ6L2Q6UXD5 910 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 HSDL2Q6YN16 418 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PXT1Q8NFP0 134 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 SCARB1Q8WTV0 552 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 POP5Q969H6 163 aaKnown RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PINK1Q9BXM7 581 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 A4GALTQ9NPC4 353 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 GPN3Q9UHW5 284 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ANKRD61A6NGH8 418 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 C4orf47A7E2U8 309 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 MCRIP1C9JLW8 97 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 ARPC1BO15143 372 aaKnown RBP9.21□□□□□ -0.93
SYNE1-203ENST00000354674 SUV39H1O43463 412 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 GCM2O75603 506 aaPredicted RBP9.21□□□□□ -0.93
SYNE1-203ENST00000354674 TIAF1O95411 115 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 IL1AP01583 271 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 SMIM6P0DI80 62 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 ARAFP10398 606 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 S100A11P31949 105 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 CRATP43155 626 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 XCR1P46094 333 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 E2F1Q01094 437 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 PHF19Q5T6S3 580 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 PWWP2BQ6NUJ5 590 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 GSG1LQ6UXU4 331 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 COX15Q7KZN9 410 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 LRRTM1Q86UE6 522 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 METTL27Q8N6F8 245 aaPredicted RBP9.21□□□□□ -0.93
SYNE1-203ENST00000354674 HORMAD2Q8N7B1 307 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF383Q8NA42 475 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 AGBL5Q8NDL9 886 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 OR7G2Q8NG99 324 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.21□□□□□ -0.93
SYNE1-203ENST00000354674 ISOC2Q96AB3 205 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 C14orf144Q96I85 54 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 KCNJ15Q99712 375 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 TLNRD1Q9H1K6 362 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 MAGIXQ9H6Y5 334 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 PLCXD1Q9NUJ7 323 aa9.21□□□□□ -0.93
SYNE1-203ENST00000354674 IGLV3-12A0A075B6K2 115 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 HMGN4O00479 90 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 CLDN4O14493 209 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 TCAPO15273 167 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 MUC1P15941 1255 aaPredicted RBP9.21□□□□□ -0.94
SYNE1-203ENST00000354674 MC3RP41968 323 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 OR1D4P47884 311 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 ANXA11P50995 505 aaKnown RBP9.21□□□□□ -0.94
SYNE1-203ENST00000354674 MAP4K2Q12851 820 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 NANOGP1Q8N7R0 232 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 SLC38A9Q8NBW4 561 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 C11orf65Q8NCR3 313 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 CCDC54Q8NEL0 328 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 OR5J2Q8NH18 312 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 CDCA4Q9BXL8 241 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 TREM1Q9NP99 234 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 PRTFDC1Q9NRG1 225 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 ZCCHC3Q9NUD5 404 aaKnown RBP9.21□□□□□ -0.94
SYNE1-203ENST00000354674 NDUFB11Q9NX14 153 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 MED11Q9P086 117 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 IL20RAQ9UHF4 553 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms