RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 NTMQ9P121 344 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 SLC25A15Q9Y619 301 aa9.81□□□□□ -0.84
RTN3-204ENST00000354497 ALPK2Q86TB3 2170 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 STX16-NPEPL1H3BU86 382 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 STX16O14662 325 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 ANGPT2O15123 496 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 EFNA2O43921 213 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 ANXA4P09525 319 aaPredicted RBP9.8□□□□□ -0.84
RTN3-204ENST00000354497 RPS2P15880 293 aaKnown RBP9.8□□□□□ -0.84
RTN3-204ENST00000354497 DDCP20711 480 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 IL2RGP31785 369 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 GPC1P35052 558 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 DEFA6Q01524 100 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 PGS1Q32NB8 556 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 SPIN4Q56A73 249 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 GALNT5Q7Z7M9 940 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 LYSMD2Q8IV50 215 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 MISPQ8IVT2 679 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 PLD6Q8N2A8 252 aaKnown RBP9.8□□□□□ -0.84
RTN3-204ENST00000354497 LINC01356Q8N9X3 169 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 ZNF540Q8NDQ6 660 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 SEMA6DQ8NFY4 1073 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 SETD6Q8TBK2 473 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 PHOSPHO1Q8TCT1 267 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 TCP10LQ8TDR4 215 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 MYDGFQ969H8 173 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 ELP4Q96EB1 424 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 OTUB1Q96FW1 271 aaPredicted RBP9.8□□□□□ -0.84
RTN3-204ENST00000354497 GPR78Q96P69 363 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 MYOZ1Q9NP98 299 aaPredicted RBP9.8□□□□□ -0.84
RTN3-204ENST00000354497 ACTR3BQ9P1U1 418 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 ARMCX1Q9P291 453 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 ZNF229Q9UJW7 825 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 PCNX3Q9H6A9 2034 aa9.8□□□□□ -0.84
RTN3-204ENST00000354497 TSC22D2O75157 780 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 PRPS2P11908 318 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 HSD3B1P14060 373 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 ATF4P18848 351 aaPredicted RBP9.79□□□□□ -0.84
RTN3-204ENST00000354497 HSD3B2P26439 372 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 DEFA1P59665 94 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 DEFA3P59666 94 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 ZNF117Q03924 483 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 HSPB3Q12988 150 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 CD226Q15762 336 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 VPS26BQ4G0F5 336 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 TOR2AQ5JU69 321 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 C9orf135Q5VTT2 229 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 CYS1Q717R9 158 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 SPATA19Q7Z5L4 167 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 ZAR1Q86SH2 424 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 OR5T2Q8NGG2 359 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 VANGL1Q8TAA9 524 aaPredicted RBP9.79□□□□□ -0.84
RTN3-204ENST00000354497 UFD1Q92890 307 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 ST6GAL2Q96JF0 529 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 AMDHD1Q96NU7 426 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 OR5B2Q96R09 309 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 PKP2Q99959 881 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 ACPTQ9BZG2 426 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 NTN4Q9HB63 628 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 ENOPH1Q9UHY7 261 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 ING1Q9UK53 422 aaPredicted RBP9.79□□□□□ -0.84
RTN3-204ENST00000354497 DYSFO75923 2080 aa9.79□□□□□ -0.84
RTN3-204ENST00000354497 A0A0A6YYJ9 748 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 A0A0G2JMP0 313 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 A0A1W2PRG6 482 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 PQLC2LA1A4F0 135 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 SLCO1B7G3V0H7 640 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 CYTIPO60759 359 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ZNF780AO75290 641 aaPredicted RBP9.78□□□□□ -0.84
RTN3-204ENST00000354497 KCNK2O95069 426 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 NGFRP08138 427 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 RBP1P09455 135 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 FCGR1AP12314 374 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 HTR2BP41595 481 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 COMPP49747 757 aaPredicted RBP9.78□□□□□ -0.84
RTN3-204ENST00000354497 HTR6P50406 440 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 GABARAPL2P60520 117 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 SLC25A3Q00325 362 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ZNF45Q02386 682 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 LGALS3BPQ08380 585 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 FLOT2Q14254 428 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ZNF124Q15973 351 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 SLC36A3Q495N2 470 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ARMC4Q5T2S8 1044 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 FBXW9Q5XUX1 488 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ZNF782Q6ZMW2 699 aaPredicted RBP9.78□□□□□ -0.84
RTN3-204ENST00000354497 NOXA1Q86UR1 476 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 STX12Q86Y82 276 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 MICU2Q8IYU8 434 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 TCTE3Q8IZS6 198 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
RTN3-204ENST00000354497 MARC2Q969Z3 335 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 APH1AQ96BI3 265 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ACSS3Q9H6R3 686 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 UBQLN4Q9NRR5 601 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 ASB6Q9NWX5 421 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 MOKQ9UQ07 419 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 CADP27708 2225 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 TENM1Q9UKZ4 2725 aa9.78□□□□□ -0.84
RTN3-204ENST00000354497 TMEM89A2RUT3 159 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms