RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SLC13A4Q9UKG4 626 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 FAM157AC9JC47 383 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 H7BY64 318 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 F10P00742 488 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 ITGA5P08648 1049 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
IFT88-202ENST00000351808 DRAM2Q6UX65 266 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 UNQ9370/PRO34162Q6UXP9 181 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 ANGPTL5Q86XS5 388 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 C15orf40Q8WUR7 153 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 DCUN1D4Q92564 292 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 EDAQ92838 391 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 ZBTB8AQ96BR9 441 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 MOGAT1Q96PD6 335 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 MYADMQ96S97 322 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 PAPLNO95428 1278 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 HLA-AP01891 365 aaKnown RBP12.11□□□□□ -0.47
IFT88-202ENST00000351808 RPN2P04844 631 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 FCGR3AP08637 254 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 BIKQ13323 160 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 MEF2DQ14814 521 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 PLEKHS1Q5SXH7 462 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 OR2A2Q6IF42 318 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 TTLL10Q6ZVT0 673 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 DND1Q8IYX4 353 aaKnown RBP12.11□□□□□ -0.47
IFT88-202ENST00000351808 LILRA3Q8N6C8 439 aaPredicted RBP12.11□□□□□ -0.47
IFT88-202ENST00000351808 ST7LQ8TDW4 575 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 C1QTNF2Q9BXJ5 285 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 METTL9Q9H1A3 318 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 NEUROD4Q9HD90 331 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 KRCC1Q9NPI7 259 aaPredicted RBP12.11□□□□□ -0.47
IFT88-202ENST00000351808 GNG8Q9UK08 70 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 KPTNQ9Y664 436 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
IFT88-202ENST00000351808 OR52A4PA6NMU1 304 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 ZNF726A6NNF4 738 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 M0QYG6 137 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 FOXE1O00358 373 aaPredicted RBP12.1□□□□□ -0.47
IFT88-202ENST00000351808 FBXO24O75426 580 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 SERPINA5P05154 406 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 SULT1A1P50225 295 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 PCBP4P57723 403 aaKnown RBP12.1□□□□□ -0.47
IFT88-202ENST00000351808 LTBQ06643 244 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 FUT5Q11128 374 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 DECR1Q16698 335 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 ALG11Q2TAA5 492 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 LPCAT3Q6P1A2 487 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 ZNF574Q6ZN55 896 aaPredicted RBP12.1□□□□□ -0.47
IFT88-202ENST00000351808 GDF7Q7Z4P5 450 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 OR9A2Q8NGT5 310 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 RELTQ969Z4 430 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 GPR61Q9BZJ8 451 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 ATG5Q9H1Y0 275 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 RGCCQ9H4X1 137 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 DUSP22Q9NRW4 184 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 UPB1Q9UBR1 384 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 DNAJB11Q9UBS4 358 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 CSAG2Q9Y5P2 127 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 ARID1AO14497 2285 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 BRWD3Q6RI45 1802 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 TRAV18A0A075B6X5 111 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 A0A087WV48 116 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 SYNDIG1LA6NDD5 238 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 NPIPB15A6NHN6 443 aaPredicted RBP12.1□□□□□ -0.47
IFT88-202ENST00000351808 MAN2B1O00754 1011 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 BHLHE40O14503 412 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 XRCC3O43542 346 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 CALCBP10092 127 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 C6P13671 934 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 NAAAQ02083 359 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 FOXO1Q12778 655 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 ATPAF1Q5TC12 328 aaPredicted RBP12.1□□□□□ -0.47
IFT88-202ENST00000351808 MBOAT2Q6ZWT7 520 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 OR52L1Q8NGH7 329 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 OR6X1Q8NH79 312 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
IFT88-202ENST00000351808 ZNF350Q9GZX5 532 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 ZCCHC3Q9NUD5 404 aaKnown RBP12.1□□□□□ -0.47
IFT88-202ENST00000351808 ATG4BQ9Y4P1 393 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
IFT88-202ENST00000351808 TEX13DA0A0J9YY54 714 aaPredicted RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 OR2AG2A6NM03 316 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 ATP1B2P14415 290 aaPredicted RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 BMP7P18075 431 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 NDUFS1P28331 727 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 NHLH2Q02577 135 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 TNFRSF9Q07011 255 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 CRMP1Q14194 572 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 AMZ1Q400G9 498 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 SPNS3Q6ZMD2 512 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 THSD4Q6ZMP0 1018 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 TMPRSS11FQ6ZWK6 438 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 GALNT16Q8N428 558 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 FRMD1Q8N878 549 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 C19orf47Q8N9M1 422 aaKnown RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 OR51L1Q8NGJ5 315 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 OR56A3Q8NH54 315 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 GPR148Q8TDV2 347 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms