RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 IGHMP01871 453 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 ZNF28P17035 718 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 APOBEC1P41238 236 aaKnown RBP18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 TMED10P49755 219 aaKnown RBP18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 NANOS3P60323 173 aaKnown RBP18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 MRPL28Q13084 256 aaKnown RBP18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 TRA2AQ13595 282 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 TRIQKQ629K1 86 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 DTWD2Q8NBA8 298 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 KLHL15Q96M94 604 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 WDR54Q9H977 334 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 B3GAT2Q9NPZ5 323 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 MRM2Q9UI43 246 aaKnown RBP18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 LAMP5Q9UJQ1 280 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 FKBP7Q9Y680 259 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 PRSS37A4D1T9 235 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 PLA2G10O15496 165 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 FLRT2O43155 660 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 UPK3AO75631 287 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 AKR7A3O95154 331 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 OR8G3PP0DMU2 310 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 NPR2P20594 1047 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 CARTPTQ16568 116 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 YIF1BQ5BJH7 314 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 CEP78Q5JTW2 689 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 IL20RBQ6UXL0 311 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 SAMD12Q8N8I0 201 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 BMPERQ8N8U9 685 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 AGBL5Q8NDL9 886 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 C19orf18Q8NEA5 215 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 OR6N2Q8NGY6 317 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 ZNF417Q8TAU3 575 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 ZNF587Q96SQ5 575 aaPredicted RBP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 INTS14Q96SY0 518 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 SACM1LQ9NTJ5 587 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 MED11Q9P086 117 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 NXT1Q9UKK6 140 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 TMEM14AQ9Y6G1 99 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 ZNF879B4DU55 563 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 ABHD16AO95870 558 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 PLGP00747 810 aaPredicted RBP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 CCL4P13236 92 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 ALOX5APP20292 161 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 TALDO1P37837 337 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 EIF2B2P49770 351 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 OR2B6P58173 313 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 ZFP36L1Q07352 338 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 HSD17B12Q53GQ0 312 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 LIPNQ5VXI9 398 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 TCEAL6Q6IPX3 200 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 LYPD8Q6UX82 237 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 AKAP14Q86UN6 197 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 TRMT10AQ8TBZ6 339 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 TCEAL3Q969E4 200 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 PMEPA1Q969W9 287 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 VSX1Q9NZR4 365 aaPredicted RBP18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 FBXO4Q9UKT5 387 aa18.37■□□□□ 0.53
CHRNA3-202ENST00000348639 ZFPL1O95159 310 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 KRT8P05787 483 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 EIF4EP06730 217 aaKnown RBP18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 EPXP11678 715 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 EGR3Q06889 387 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 AGAP6Q5VW22 663 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 ZNF517Q6ZMY9 492 aaPredicted RBP18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 RAB43Q86YS6 212 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 YIPF7Q8N8F6 280 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 AGAP4Q96P64 663 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 NPAS1Q99742 590 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 NPAP1Q9NZP6 1156 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 KLRF1Q9NZS2 232 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 B9D1Q9UPM9 204 aa18.36■□□□□ 0.53
CHRNA3-202ENST00000348639 ETV2O00321 342 aaPredicted RBP18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 PHYHO14832 338 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 OR2J2O76002 312 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 PAHP00439 452 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 MSX1P28360 303 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 RBMS1P29558 406 aaKnown RBP18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 CASP3P42574 277 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 TPTEP56180 551 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 SELENBP1Q13228 472 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 MFSD13AQ14CX5 517 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 BICRALQ6AI39 1079 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 ARSKQ6UWY0 536 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 DPY19L4Q7Z388 723 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 UBQLNLQ8IYU4 475 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 SCAIQ8N9R8 606 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 SLC22A8Q8TCC7 542 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 KCNJ15Q99712 375 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 GPN3Q9UHW5 284 aaPredicted RBP18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 TMEM221A6NGB7 291 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 M0R296 226 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 RPP14O95059 124 aaKnown RBP18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 CCKBRP32239 447 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 CENPAP49450 140 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 BLVRAP53004 296 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 ALKBH1Q13686 389 aaKnown RBP18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 SYT9Q86SS6 491 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 OR4M1Q8NGD0 313 aa18.35■□□□□ 0.53
CHRNA3-202ENST00000348639 MFSD8Q8NHS3 518 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms