RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SERPINA7P05543 415 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 XCR1P46094 333 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF140P52738 457 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 AQP6Q13520 282 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 OR5M10Q6IEU7 315 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 MAMDC2Q7Z304 686 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 FAM26EQ8N5C1 309 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 OR4K5Q8NGD3 323 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 CDS1Q92903 461 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 MCHR2Q969V1 340 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 ISL2Q96A47 359 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 F6UZH7 168 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 ANKRD28O15084 1053 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 PLRG1O43660 514 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF43P17038 809 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 FRKP42685 505 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 CTBSQ01459 385 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 SIAH3Q8IW03 269 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 SIGLECL1Q8N7X8 197 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 MS4A3Q96HJ5 214 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 MS4A4EQ96PG1 132 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 C2orf42Q9NWW7 574 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 IL19Q9UHD0 177 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 AQP7P3A6NL99 342 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF850A8MQ14 1090 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 GPR37L1O60883 481 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CNOT4O95628 575 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 SCG5P05408 212 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ARAFP10398 606 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 TBXA2RP21731 343 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 USF1P22415 310 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CD82P27701 267 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ABCD3P28288 659 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CNR2P34972 360 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 HSD11B2P80365 405 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF440Q8IYI8 595 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 UBR2Q8IWV8 1755 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 HMX2A2RU54 273 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 LILRB3O75022 631 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 HOXD9P28356 352 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 EMP2P54851 167 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 OR10A3P58181 314 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 SQSTM1Q13501 440 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CYS1Q717R9 158 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 MFSD4AQ8N468 514 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ADAMTS18Q8TE60 1221 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF442Q9H7R0 627 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 NUP98P52948 1817 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 MYO9BQ13459 2157 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 HBQ1P09105 142 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 METTL15P1P0C7V9 234 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 AMY2BP19961 511 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 S100A7P31151 101 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ARG2P78540 354 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 P2RY14Q15391 338 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 LTB4RQ15722 352 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 PRAMEF8Q5VWM4 474 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 PRAMEF7Q5VXH5 474 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 WDR88Q6ZMY6 472 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 S100A7AQ86SG5 101 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 EID2Q8N6I1 236 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 ACOT4Q8N9L9 421 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 OR52R1Q8NGF1 315 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 REEP6Q96HR9 211 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 FOXN4Q96NZ1 517 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 TOPAZ1Q8N9V7 1692 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 PLSCR5A0PG75 271 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 SLC22A31A6NKX4 558 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 C1SP09871 688 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 GABRB1P18505 474 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CCKARP32238 428 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 GJA4P35212 333 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 EBPQ15125 230 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CTSL3PQ5NE16 218 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 CPXM2Q8N436 756 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 TP53I13Q8NBR0 393 aaPredicted RBP10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 LMF1Q96S06 567 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 SMIM3Q9BZL3 60 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 NXF2Q9GZY0 626 aaKnown RBP10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 MMP26Q9NRE1 261 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 LRIT1Q9P2V4 623 aa10.28□□□□□ -0.76
SMARCE1-202ENST00000348513 UGDHO60701 494 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 NCR1O76036 304 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 MMP7P09237 267 aaPredicted RBP10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 CD79AP11912 226 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 LCN6P62502 163 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 KIAA0895LQ68EN5 471 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 LCTLQ6UWM7 567 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 GPR155Q7Z3F1 870 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 KLHDC9Q8NEP7 349 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 GPR150Q8NGU9 434 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 HOXB13Q92826 284 aaPredicted RBP10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 TBC1D20Q96BZ9 403 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 FAM103A1Q9BTL3 118 aaKnown RBP10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 APMAPQ9HDC9 416 aa10.27□□□□□ -0.76
SMARCE1-202ENST00000348513 TMEM82A0PJX8 343 aa10.27□□□□□ -0.77
SMARCE1-202ENST00000348513 ZNF729A6NN14 1252 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms