RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DGAT2Q96PD7 388 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 OR1F2PQ96R84 312 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 PTDSS2Q9BVG9 487 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 TRIM2Q9C040 744 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 OR8D2Q9GZM6 311 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 CHST6Q9GZX3 395 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 SLA2Q9H6Q3 261 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 MRPL22Q9NWU5 206 aaKnown RBP5.47□□□□□ -1.53
CLCN3-201ENST00000347613 PIPOXQ9P0Z9 390 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 FOXJ3Q9UPW0 622 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 OR10H1Q9Y4A9 318 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 UTS2O95399 124 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 IGKV3-11P04433 115 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 FOLR1P15328 257 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF250P15622 560 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 DRD1P21728 446 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 CCR9P51686 369 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 MRPS21P82921 87 aaKnown RBP5.47□□□□□ -1.53
CLCN3-201ENST00000347613 OC90Q02509 493 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-201ENST00000347613 MFGE8Q08431 387 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-201ENST00000347613 PON3Q15166 354 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 INPP5JQ15735 1006 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-201ENST00000347613 LINC00303Q3SY05 128 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 C1orf189Q5VU69 101 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 BICRALQ6AI39 1079 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 TIGD3Q6B0B8 471 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 MZT2BQ6NZ67 158 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 NLRC3Q7RTR2 1065 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 TPRA1Q86W33 373 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 PHF21AQ96BD5 680 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 GPR137Q96N19 417 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF285Q96NJ3 590 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 CDCA3Q99618 268 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-201ENST00000347613 OR51J1Q9H342 316 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 DLL4Q9NR61 685 aa5.47□□□□□ -1.53
CLCN3-201ENST00000347613 NOSIPQ9Y314 301 aaKnown RBP5.47□□□□□ -1.53
CLCN3-201ENST00000347613 IGHV1OR15-9A0A0B4J2B8 117 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 A0A1W2PR77 199 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 TEX46H3BTG2 121 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 FLRT2O43155 660 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GATBO75879 557 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GLCEO94923 617 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 UBL3O95164 117 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SIX6O95475 246 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ITGA5P08648 1049 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 VSIG10L2P0DP72 767 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RNH1P13489 461 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 PTBP1P26599 531 aaKnown RBP eCLIP5.46□□□□□ -1.542e-10■■■■■ 53.9
CLCN3-201ENST00000347613 CAPZBP47756 277 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 P2RX1P51575 399 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SMAD2Q15796 467 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM44Q2T9K0 475 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 HSD17B12Q53GQ0 312 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 DMRTC1Q5HYR2 192 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 THOC7Q6I9Y2 204 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 PYHIN1Q6K0P9 492 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RPL22L1Q6P5R6 122 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 LRRN1Q6UXK5 716 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 CDC20BQ86Y33 519 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SLITRK4Q8IW52 837 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GPALPP1Q8IXQ4 340 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SYNPRQ8TBG9 265 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 LMX1AQ8TE12 382 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 WBP1Q96G27 269 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GAL3ST1Q99999 423 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GTPBP2Q9BX10 602 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 TEX12Q9BXU0 123 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 C20orf85Q9H1P6 137 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 PRDM9Q9NQV7 894 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 INPP5EQ9NRR6 644 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SLC22A11Q9NSA0 550 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 FBXL3Q9UKT7 428 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 HIF3AQ9Y2N7 669 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF337Q9Y3M9 751 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 NPFFR2Q9Y5X5 522 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 KIR2DS5A0A0G2JLQ3 304 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 A0A0G2JNG1 304 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 OR4C45A6NMZ5 311 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 KIR2DS3K7RE56 304 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ARPC3O15145 178 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 NSA2O95478 260 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SULT1A3P0DMM9 295 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SULT1A4P0DMN0 295 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 KLK2P20151 261 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ERP29P30040 261 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 CSF2RBP32927 897 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 PER3P56645 1201 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 INSM1Q01101 510 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SNTA1Q13424 505 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 KIR2DS5Q14953 304 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 POU4F3Q15319 338 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RSPO4Q2I0M5 234 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ALG10Q5BKT4 473 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 MANEAQ5SRI9 462 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SFRP5Q5T4F7 317 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 B3GNTL1Q67FW5 361 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RFPL4BQ6ZWI9 263 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 LINGO2Q7L985 606 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SYS1Q8N2H4 156 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms