RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TXNDC15Q96J42 360 aa13.8□□□□□ -0.2
TSPAN4-201ENST00000346501 KRCC1Q9NPI7 259 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-201ENST00000346501 MEPEQ9NQ76 525 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-201ENST00000346501 INIPQ9NRY2 104 aa13.8□□□□□ -0.2
TSPAN4-201ENST00000346501 EGFL7Q9UHF1 273 aa13.8□□□□□ -0.2
TSPAN4-201ENST00000346501 PRRC2AP48634 2157 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-201ENST00000346501 CSMD1Q96PZ7 3565 aa13.8□□□□□ -0.2
TSPAN4-201ENST00000346501 PRR14LQ5THK1 2151 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 F8P00451 2351 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 SHISA9B4DS77 424 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 IGHG1P01857 330 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 IFI30P13284 250 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 ITGA2P17301 1181 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 TCN1P20061 433 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 ARR3P36575 388 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 PTH2RP49190 550 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 FABP6P51161 128 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 UGT2B15P54855 530 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 ATP5J2P56134 94 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 CLRN1P58418 232 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 C3orf36Q3SXR2 165 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 Q5PR19 223 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 ZNF730Q6ZMV8 503 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 ZNF813Q6ZN06 617 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 TSPYL5Q86VY4 417 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 PFN4Q8NHR9 129 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 MCUR1Q96AQ8 359 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 BPIFA2Q96DR5 249 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 SLC25A44Q96H78 314 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 SLC38A2Q96QD8 506 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 DHRS9Q9BPW9 319 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 ANKRD19PQ9H560 264 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 TAS2R5Q9NYW4 299 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 A4GNTQ9UNA3 340 aa13.79□□□□□ -0.2
TSPAN4-201ENST00000346501 FARS2O95363 451 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 FOSL1P15407 271 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ZNF84P51523 738 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 SMIM11AP58511 58 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 CHRNB3Q05901 458 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 RPL18Q07020 188 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ETFDHQ16134 617 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ANKDD1AQ495B1 522 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ZNF544Q6NX49 715 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 LINGO2Q7L985 606 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 SLC46A3Q7Z3Q1 461 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 YTHDF3Q7Z739 585 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 RNF148Q8N7C7 305 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 FAM169BQ8N8A8 192 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 IL17RDQ8NFM7 739 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 LILRB1Q8NHL6 650 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 LIPHQ8WWY8 451 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ACOT11Q8WXI4 607 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 CDRT15Q96T59 188 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 FOXB1Q99853 325 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 BDH2Q9BUT1 245 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 KATNB1Q9BVA0 655 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 GORASP2Q9H8Y8 452 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 BARX1Q9HBU1 254 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ARL8BQ9NVJ2 186 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 GLTPQ9NZD2 209 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 GMPR2Q9P2T1 348 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 RHCGQ9UBD6 479 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 FBXL3Q9UKT7 428 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 TMEM5Q9Y2B1 443 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ENPP4Q9Y6X5 453 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 ARID1AO14497 2285 aa13.78□□□□□ -0.2
TSPAN4-201ENST00000346501 STAMBPO95630 424 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 F13BP05160 661 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 CD79AP11912 226 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 HSD17B1P14061 328 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 CBR1P16152 277 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 SLC25A3Q00325 362 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 MELKQ14680 651 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 OTOGQ6ZRI0 2925 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 PIWIL3Q7Z3Z3 882 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 OAFQ86UD1 273 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 DEFB107AQ8IZN7 70 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 MUC15Q8N387 334 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 WFDC11Q8NEX6 87 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 NSL1Q96IY1 281 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 NSMCE2Q96MF7 247 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 TMUB1Q9BVT8 246 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 GRIP2Q9C0E4 1043 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 CBLN4Q9NTU7 201 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 DCAF13Q9NV06 445 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 ZNF701Q9NV72 531 aaPredicted RBP13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 MOKQ9UQ07 419 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 PMF1-BGLAPU3KQ54 211 aa13.77□□□□□ -0.21
TSPAN4-201ENST00000346501 CADP27708 2225 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 EFCAB9A8MZ26 197 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 CENPBD1B2RD01 187 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 RAB36O95755 333 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 H1F0P07305 194 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 DANCRP0C864 163 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 PAX1P15863 534 aa13.76□□□□□ -0.21
TSPAN4-201ENST00000346501 RHCEP18577 417 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms