RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SERPINA12Q8IW75 414 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 SDR16C5Q8N3Y7 309 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 ZNF441Q8N8Z8 693 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 OR6N2Q8NGY6 317 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 OR10AC1Q8NH08 325 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 DAZLQ92904 295 aaKnown RBP13.98□□□□□ -0.17
UPF3B-202ENST00000345865 SCMH1Q96GD3 660 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 FOXN4Q96NZ1 517 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 DPYSL5Q9BPU6 564 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 PCED1AQ9H1Q7 454 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 GHITMQ9H3K2 345 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 TEKT2Q9UIF3 430 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 ADAMTS20P59510 1910 aa13.98□□□□□ -0.17
UPF3B-202ENST00000345865 IGHV3-20A0A0C4DH32 117 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 H3BSH0 61 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 DUX1O43812 170 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 SCO2O43819 266 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 PLGP00747 810 aaPredicted RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 HIST1H2ABP04908 130 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 ALOX5APP20292 161 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 ERP29P30040 261 aaKnown RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 SOX2P48431 317 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 RPS15P62841 145 aaKnown RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 KLF9Q13886 244 aaPredicted RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 FCN2Q15485 313 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 HLA-DQA1Q5Y7H0 255 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 STAC2Q6ZMT1 411 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 LRRC69Q6ZNQ3 347 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 HIST3H2AQ7L7L0 130 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 OR51A4Q8NGJ6 313 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 OR2T4Q8NH00 348 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 OR5AK2Q8NH90 309 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 HIST1H2ACQ93077 130 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 SLC25A36Q96CQ1 311 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 ZNF501Q96CX3 271 aaPredicted RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 NUDT22Q9BRQ3 303 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 TBL1XR1Q9BZK7 514 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 LIN7BQ9HAP6 207 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 SLC22A11Q9NSA0 550 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 SEMA5BQ9P283 1151 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 LAMP5Q9UJQ1 280 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 A0A1W2PQD3 144 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 TRABD2BA6NFA1 517 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 GSTZ1O43708 216 aaPredicted RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 MT-ND4P03905 459 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 TACSTD2P09758 323 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 PITPNAQ00169 270 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 FAM205BPQ63HN1 556 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 BICRALQ6AI39 1079 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 LAMTOR1Q6IAA8 161 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 KCTD20Q7Z5Y7 419 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 DNAAF1Q8NEP3 725 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 ZFAND1Q8TCF1 268 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 SMIM4Q8WVI0 70 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 ADAMTS14Q8WXS8 1223 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 DPAGT1Q9H3H5 408 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 ING3Q9NXR8 418 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 MRPL15Q9P015 296 aaKnown RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 IKZF2Q9UKS7 526 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 V9GY05 133 aa13.97□□□□□ -0.17
UPF3B-202ENST00000345865 ASCC3Q8N3C0 2202 aaKnown RBP13.97□□□□□ -0.17
UPF3B-202ENST00000345865 TRAV36DV7A0A075B6V5 113 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 A0A1B0GX78 115 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 C7orf66A4D0T2 115 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 OR4C45A6NMZ5 311 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 AKR7A2O43488 359 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 FADS1O60427 444 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 GLB1P16278 677 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 TNK1Q13470 666 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 ODF4Q2M2E3 257 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 Q499Y3 187 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 C6orf183Q5T699 404 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 TMPRSS9Q7Z410 1059 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 FAM220AQ7Z4H9 259 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 ADGRG3Q86Y34 549 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 PRSS35Q8N3Z0 413 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 ATOH1Q92858 354 aaPredicted RBP13.96□□□□□ -0.17
UPF3B-202ENST00000345865 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 NPAS1Q99742 590 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 CACNG6Q9BXT2 260 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 NIPAL2Q9H841 368 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 FGF21Q9NSA1 209 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 OR5V1Q9UGF6 321 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 KCNG2Q9UJ96 466 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 CPAMD8Q8IZJ3 1885 aa13.96□□□□□ -0.17
UPF3B-202ENST00000345865 TRAV8-7A0A075B6U6 113 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 TRBV5-5A0A0J9YX44 114 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 CTDSPLO15194 276 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 CDC40O60508 579 aaKnown RBP eCLIP13.96□□□□□ -0.18
UPF3B-202ENST00000345865 EIF4E2O60573 245 aaKnown RBP13.96□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF354AO60765 605 aaPredicted RBP13.96□□□□□ -0.18
UPF3B-202ENST00000345865 NPIPB7O75200 414 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 RENP00797 406 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 PTHLHP12272 177 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 GDNFP39905 211 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 MRPL28Q13084 256 aaKnown RBP13.96□□□□□ -0.18
UPF3B-202ENST00000345865 MAB21L1Q13394 359 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 SMAD2Q15796 467 aaKnown RBP13.96□□□□□ -0.18
UPF3B-202ENST00000345865 TMEM255AQ5JRV8 349 aa13.96□□□□□ -0.18
UPF3B-202ENST00000345865 GPR139Q6DWJ6 353 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms