RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 S100A13Q99584 98 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 RNF121Q9H920 327 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 KLK11Q9UBX7 282 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 FITM1A5D6W6 292 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 GSTT2P0CG29 244 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 GSTT2BP0CG30 244 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 FRKP42685 505 aaPredicted RBP12.1□□□□□ -0.47
CASC4-202ENST00000345795 PTH2RP49190 550 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 YRDCQ86U90 279 aaKnown RBP12.1□□□□□ -0.47
CASC4-202ENST00000345795 CD163Q86VB7 1156 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 BOLLQ8N9W6 283 aaKnown RBP12.1□□□□□ -0.47
CASC4-202ENST00000345795 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 FBXO8Q9NRD0 319 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 DKKL1Q9UK85 242 aa12.1□□□□□ -0.47
CASC4-202ENST00000345795 MUC6Q6W4X9 2439 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 P2RY10O00398 339 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 WISP1O95388 367 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 INHBBP09529 407 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 GTF2F2P13984 249 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 GLB1P16278 677 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 PITPNBP48739 271 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 NXPH1P58417 271 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 GALNT6Q8NCL4 622 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 TXNDC15Q96J42 360 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 RBP7Q96R05 134 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 R4GN57 208 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 ESPL1Q14674 2120 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 ABCA4P78363 2273 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 LANCL1O43813 399 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 OR7A10O76100 309 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 ZFPL1O95159 310 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 TP53P04637 393 aaPredicted RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 ATAD3CQ5T2N8 411 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 OR8H3Q8N146 312 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 OR13C3Q8NGS6 347 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 OR13C9Q8NGT0 318 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 APOBEC4Q8WW27 367 aaKnown RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 ASB12Q8WXK4 309 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 CCDC59Q9P031 241 aaKnown RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 DHDHQ9UQ10 334 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 PCDH15Q96QU1 1955 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 SIX6O95475 246 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 GLI4P10075 376 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 TCN2P20062 427 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 S1PR1P21453 382 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 TGM1P22735 817 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 ACAA2P42765 397 aaKnown RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 GPR3P46089 330 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 FXYD6P3P58550 94 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 PRPS1P60891 318 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 DCDP81605 110 aaKnown RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 SELENBP1Q13228 472 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 GALEQ14376 348 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 ELAVL1Q15717 326 aaKnown RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 KLHL26Q53HC5 615 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 GARNL3Q5VVW2 1013 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 NCCRP1Q6ZVX7 275 aaPredicted RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 FAM219AQ8IW50 185 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 IFI44Q8TCB0 444 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 TM4SF19Q96DZ7 209 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 PLEKHB1Q9UF11 243 aaPredicted RBP12.09□□□□□ -0.47
CASC4-202ENST00000345795 ALG5Q9Y673 324 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 PRR14LQ5THK1 2151 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 RALGAPA1Q6GYQ0 2036 aa12.09□□□□□ -0.47
CASC4-202ENST00000345795 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 TMEM129A0AVI4 362 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 SULT2B1O00204 365 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 SLC33A1O00400 549 aaPredicted RBP12.08□□□□□ -0.47
CASC4-202ENST00000345795 ITGA5P08648 1049 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 ZNF43P17038 809 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 ZNF81P51508 661 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 ARFIP1P53367 373 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 PRKCDQ05655 676 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 DCXRQ7Z4W1 244 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 OR6V1Q8N148 313 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 S100A16Q96FQ6 103 aaKnown RBP12.08□□□□□ -0.47
CASC4-202ENST00000345795 SLC46A1Q96NT5 459 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 EPHA6Q9UF33 1036 aa12.08□□□□□ -0.47
CASC4-202ENST00000345795 FXYD6-FXYD2A0A087WZ82 144 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 ARPC1BO15143 372 aaKnown RBP12.08□□□□□ -0.48
CASC4-202ENST00000345795 PTTG1O95997 202 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 ITGA3P26006 1051 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 EVI2BP34910 448 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 KIR2DL3P43628 341 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 STARP49675 285 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 ACTC1P68032 377 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 ACTA1P68133 377 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 NKAPLQ5M9Q1 402 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 C1orf140Q5VVS0 124 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 AGAP6Q5VW22 663 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 OR14L1PQ8NHC6 308 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 FLVCR1-AS1Q8TAF5 88 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 BRIX1Q8TDN6 353 aaKnown RBP12.08□□□□□ -0.48
CASC4-202ENST00000345795 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
CASC4-202ENST00000345795 NARS2Q96I59 477 aaKnown RBP12.08□□□□□ -0.48
CASC4-202ENST00000345795 AGAP4Q96P64 663 aa12.08□□□□□ -0.48
CASC4-202ENST00000345795 WWTR1Q9GZV5 400 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms